GH31_ORYSJ
ID GH31_ORYSJ Reviewed; 610 AA.
AC Q8LQM5; Q0JIP7;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;
DE EC=6.3.2.-;
DE AltName: Full=Auxin-responsive GH3-like protein 1;
DE Short=OsGH3-1;
GN Name=GH3.1; OrderedLocusNames=Os01g0785400, LOC_Os01g57610;
GN ORFNames=B1070A12.26, OsJ_03707 {ECO:0000312|EMBL:EAZ13782.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=15856348; DOI=10.1007/s10142-005-0142-5;
RA Jain M., Kaur N., Tyagi A.K., Khurana J.P.;
RT "The auxin-responsive GH3 gene family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:36-46(2006).
CC -!- FUNCTION: May catalyze the synthesis of indole-3-acetic acid (IAA)-
CC amino acid conjugates, providing a mechanism for the plant to cope with
CC the presence of excess auxin. {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers.
CC {ECO:0000269|PubMed:15856348}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:15856348}.
CC -!- SIMILARITY: Belongs to the IAA-amido conjugating enzyme family.
CC {ECO:0000305}.
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DR EMBL; AP003406; BAB92590.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF06381.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS74687.1; -; Genomic_DNA.
DR EMBL; CM000138; EAZ13782.1; -; Genomic_DNA.
DR EMBL; AK063368; BAG88666.1; -; mRNA.
DR RefSeq; XP_015643474.1; XM_015787988.1.
DR AlphaFoldDB; Q8LQM5; -.
DR SMR; Q8LQM5; -.
DR STRING; 4530.OS01T0785400-01; -.
DR PaxDb; Q8LQM5; -.
DR PRIDE; Q8LQM5; -.
DR EnsemblPlants; Os01t0785400-01; Os01t0785400-01; Os01g0785400.
DR GeneID; 4327043; -.
DR Gramene; Os01t0785400-01; Os01t0785400-01; Os01g0785400.
DR KEGG; osa:4327043; -.
DR eggNOG; ENOG502QQAN; Eukaryota.
DR HOGENOM; CLU_016249_2_1_1; -.
DR InParanoid; Q8LQM5; -.
DR OMA; PRCVNYA; -.
DR OrthoDB; 374623at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q8LQM5; OS.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0016881; F:acid-amino acid ligase activity; IBA:GO_Central.
DR GO; GO:0009733; P:response to auxin; IC:Gramene.
DR GO; GO:0009416; P:response to light stimulus; IC:Gramene.
DR InterPro; IPR004993; GH3.
DR PANTHER; PTHR31901; PTHR31901; 1.
DR Pfam; PF03321; GH3; 1.
PE 2: Evidence at transcript level;
KW Ligase; Reference proteome.
FT CHAIN 1..610
FT /note="Probable indole-3-acetic acid-amido synthetase
FT GH3.1"
FT /id="PRO_0000203578"
SQ SEQUENCE 610 AA; 67367 MW; 0B633A6A4718C155 CRC64;
MPEAPTAKTA PAYGYAPGAH AEALEFIEHV TANAGQVQRR VLGEILAQNA PAEYLRRYGI
PGSPDVVDAF RRLVPLVTYE GLQPDILRIA NGDTSPIFSG KPISEFLTSS GTSGGERKLM
PTIADEMNRR SLLYSLLMPV MSQSVSGLDK GKAMYLLFVK AESRTPGGLA ARPVLTSYYR
SRQFLDRPRD PYTSYTSPDE AILCVDSYQS MYAQLLCGLV HRADVLRVGA VFASGFLRAI
HFLEKHWARL CHDIRTGELD PEITDRVVRD AVGRVLRADP ALADAIEDEC ARASWEGIIR
RLWPRTKYID VIVTGTMSQY IPTLEFYGGG LPLTCTMYAS SECYFGLNLN PMCKPSDVAY
TLIPTMCYYE FLPVNCNNAT AEASHRDLVD LVDVKLGHEY ELVVTTYSGL YRYRVGDVLR
VAGFKNKAPM FSFVRRQNVA LSVDSDKTDE TELHAAVSGA VQHLAPFGAS LVEYTSYADA
ATIPGHYVLF WELRAGSTAV PASVFEECCL SVEEALNSVY RQGRACDRSI GPLEIRVVAE
GTFDKLMDYA ISRGASINQY KAPRCVRPGP VVELLDARVQ GKYFSPKCPK WSPGNKQWNK
SKDLVGKGDA