ID   GH34_ORYSJ              Reviewed;         629 AA.
AC   Q60EJ6; Q0DGZ2;
DT   22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT   23-NOV-2004, sequence version 1.
DT   03-AUG-2022, entry version 85.
DE   RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.4;
DE            EC=6.3.2.-;
DE   AltName: Full=Auxin-responsive GH3-like protein 4;
DE            Short=OsGH3-4;
GN   Name=GH3.4; OrderedLocusNames=Os05g0500900, LOC_Os05g42150;
GN   ORFNames=OsJ_19094 {ECO:0000312|EMBL:EEE64261.1}, OSJNBa0017K09.2;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA   Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA   Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA   Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT   "A fine physical map of the rice chromosome 5.";
RL   Mol. Genet. Genomics 274:337-345(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [7]
RP   TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX   PubMed=15856348; DOI=10.1007/s10142-005-0142-5;
RA   Jain M., Kaur N., Tyagi A.K., Khurana J.P.;
RT   "The auxin-responsive GH3 gene family in rice (Oryza sativa).";
RL   Funct. Integr. Genomics 6:36-46(2006).
CC   -!- FUNCTION: May catalyze the synthesis of indole-3-acetic acid (IAA)-
CC       amino acid conjugates, providing a mechanism for the plant to cope with
CC       the presence of excess auxin. {ECO:0000250}.
CC   -!- TISSUE SPECIFICITY: Expressed in flowers.
CC       {ECO:0000269|PubMed:15856348}.
CC   -!- INDUCTION: By auxin. {ECO:0000269|PubMed:15856348}.
CC   -!- SIMILARITY: Belongs to the IAA-amido conjugating enzyme family.
CC       {ECO:0000305}.
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DR   EMBL; AC130597; AAU90225.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF17881.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS94761.1; -; Genomic_DNA.
DR   EMBL; CM000142; EEE64261.1; -; Genomic_DNA.
DR   EMBL; AK101932; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015638110.1; XM_015782624.1.
DR   AlphaFoldDB; Q60EJ6; -.
DR   SMR; Q60EJ6; -.
DR   STRING; 4530.OS05T0500900-01; -.
DR   PaxDb; Q60EJ6; -.
DR   PRIDE; Q60EJ6; -.
DR   EnsemblPlants; Os05t0500900-01; Os05t0500900-01; Os05g0500900.
DR   GeneID; 4339234; -.
DR   Gramene; Os05t0500900-01; Os05t0500900-01; Os05g0500900.
DR   KEGG; osa:4339234; -.
DR   eggNOG; ENOG502QQAN; Eukaryota.
DR   HOGENOM; CLU_016249_2_1_1; -.
DR   InParanoid; Q60EJ6; -.
DR   OMA; FEDCCFT; -.
DR   OrthoDB; 374623at2759; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000007752; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   Genevisible; Q60EJ6; OS.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0016881; F:acid-amino acid ligase activity; IBA:GO_Central.
DR   GO; GO:0009733; P:response to auxin; IC:Gramene.
DR   GO; GO:0009416; P:response to light stimulus; IC:Gramene.
DR   InterPro; IPR004993; GH3.
DR   PANTHER; PTHR31901; PTHR31901; 1.
DR   Pfam; PF03321; GH3; 1.
PE   2: Evidence at transcript level;
KW   Ligase; Reference proteome.
FT   CHAIN           1..629
FT                   /note="Probable indole-3-acetic acid-amido synthetase
FT                   GH3.4"
FT                   /id="PRO_0000203581"
FT   CONFLICT        447
FT                   /note="V -> A (in Ref. 6; AK101932)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   629 AA;  68789 MW;  01AFD5AAAC422A70 CRC64;
     MPEAVAAAVS PAAAAATAMC AEHREKLEHI ERVTRNAGQE QRRVLEEILA QNAQAEYLRR
     LGVPGDAPGA DEAFRRLAPL VTYEDILPDV LRIANGDTSP ILSGKPVSEF LTSSGTSGGE
     RKLMPTIEEE MERRSGLYSL LMPVMSRQVP GLDKGKAMYL YFVKSEWRTP GGLPARPVLT
     SFYRSRYFLE RPHDPYTVYT SPDEAVLCED AYQSMYAQLI CGLVHRADVL RVGAVFASGF
     LRAIRFLEKH WPSLCRDIRA GELDGGVTDP AVRGAVGRVL RGADPALADA IEAECARPSW
     QGIIRRVWPS TKYIDVIVTG AMAQYIPTLE FYGGGLPLAC TMYASSECYF GLNLNPMCKP
     SEVAYTLIPT MCYFEFLPVN SGANDVAAPE PDHRGLVDLV DVKLGHEYEL VVTTYSGLYR
     YRVGDVLRVA GFKNAAPMFA FVRRKNVALS IDSDKTDEAE LHAAVTEAVQ HLAPFGASLV
     EYTSYADTAT TIPGHYVLFW ELRSPAGGTP VPASVFEDCC LAVEEGLNSV YRQCRAADRS
     IGPLEIRVVA DGTFDKLMDY ALSRGASINQ YKAPRCVRPG PVVELLDGRV QATYFSPKCP
     KWCAGGNKQW ISSGAAAKKT TTTCDSLAV