GH39_ORYSJ
ID GH39_ORYSJ Reviewed; 441 AA.
AC Q6ZLA3;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.9;
DE EC=6.3.2.-;
DE AltName: Full=Auxin-responsive GH3-like protein 9;
DE Short=OsGH3-9;
GN Name=GH3.9; OrderedLocusNames=Os07g0576500, LOC_Os07g38890;
GN ORFNames=OJ1065_B06.9;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [4]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=15856348; DOI=10.1007/s10142-005-0142-5;
RA Jain M., Kaur N., Tyagi A.K., Khurana J.P.;
RT "The auxin-responsive GH3 gene family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:36-46(2006).
CC -!- FUNCTION: May catalyze the synthesis of indole-3-acetic acid (IAA)-
CC amino acid conjugates, providing a mechanism for the plant to cope with
CC the presence of excess auxin. {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in etiolated seedlings and roots.
CC {ECO:0000269|PubMed:15856348}.
CC -!- INDUCTION: At low level by auxin. {ECO:0000269|PubMed:15856348}.
CC -!- SIMILARITY: Belongs to the IAA-amido conjugating enzyme family.
CC {ECO:0000305}.
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DR EMBL; AP003804; BAC83064.1; -; Genomic_DNA.
DR EMBL; AP014963; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AK106839; -; NOT_ANNOTATED_CDS; mRNA.
DR AlphaFoldDB; Q6ZLA3; -.
DR SMR; Q6ZLA3; -.
DR STRING; 39947.Q6ZLA3; -.
DR PaxDb; Q6ZLA3; -.
DR PRIDE; Q6ZLA3; -.
DR InParanoid; Q6ZLA3; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0016881; F:acid-amino acid ligase activity; IBA:GO_Central.
DR GO; GO:0009733; P:response to auxin; IC:Gramene.
DR GO; GO:0009416; P:response to light stimulus; IC:Gramene.
DR InterPro; IPR004993; GH3.
DR PANTHER; PTHR31901; PTHR31901; 1.
DR Pfam; PF03321; GH3; 1.
PE 2: Evidence at transcript level;
KW Ligase; Reference proteome.
FT CHAIN 1..441
FT /note="Probable indole-3-acetic acid-amido synthetase
FT GH3.9"
FT /id="PRO_0000203586"
SQ SEQUENCE 441 AA; 48463 MW; 74EF1CC114D489A1 CRC64;
MFVKSETKTR GGLTAWFALT SVYKSEQFKS MAIAYTSPTA AILCEDAFQS MYAQMVCGLC
QRHDVVRFGA VFAAALVRAI RFLQLNWGQL AADIEAGELG PHVADPSVRE AVSGILRSDA
ELAEFVRIEC SKGDWAGIIT RIWPNTKYVD AIVTGAMAQY IRTLQYYSGG LPIVSTSYAS
SECFFGINLR PVCDPSEVSY TIMPNTAYFE FLPVGEVVDA TNLVDLARVE VGREYEVVIT
TYAGLSRYRV GDVLRVTGFH NAAPQFRFVR RQSVLLSVEL DKTDEAELHR AVERASSALL
RPRGVSVAEY TSRACTERIP GHYVVYWELL TESPVGAGDG DTVDGETLGR CCLEMEEALS
AVYRQGRVAD GSIGPLEIRI VRPGTFEEVM DLAVSRGTSI GQYKVPQCVT VPSVVELLDS
RVVSSQFSPA LPHWIPTPRS D