GIMD1_HUMAN
ID GIMD1_HUMAN Reviewed; 217 AA.
AC P0DJR0;
DT 03-OCT-2012, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2012, sequence version 1.
DT 03-AUG-2022, entry version 49.
DE RecName: Full=GTPase IMAP family member GIMD1;
DE AltName: Full=GIMAP family P-loop NTPase domain-containing protein 1;
GN Name=GIMD1;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15815621; DOI=10.1038/nature03466;
RA Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P.,
RA Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C.,
RA Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L.,
RA Du H., Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A.,
RA Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J.,
RA Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M.,
RA Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T.,
RA Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S.,
RA Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
RA McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
RA Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S.,
RA Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C.,
RA Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M.,
RA Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C.,
RA Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J.,
RA Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E.,
RA Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X.,
RA Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M.,
RA Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
RA Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
RA Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H.,
RA Wilson R.K.;
RT "Generation and annotation of the DNA sequences of human chromosomes 2 and
RT 4.";
RL Nature 434:724-731(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 79-146.
RA Stevens M., Wei C., Gross S.S., McPherson J., Brent M.R.;
RT "Exhaustive RT-PCR and sequencing of all novel TWINSCAN predictions in
RT human.";
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like
CC GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family.
CC IAN subfamily. {ECO:0000305}.
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DR EMBL; AC093680; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DN831977; -; NOT_ANNOTATED_CDS; mRNA.
DR CCDS; CCDS82942.1; -.
DR RefSeq; NP_001182067.1; NM_001195138.1.
DR AlphaFoldDB; P0DJR0; -.
DR SMR; P0DJR0; -.
DR iPTMnet; P0DJR0; -.
DR PhosphoSitePlus; P0DJR0; -.
DR BioMuta; GIMD1; -.
DR DMDM; 408407619; -.
DR MassIVE; P0DJR0; -.
DR PeptideAtlas; P0DJR0; -.
DR PRIDE; P0DJR0; -.
DR DNASU; 100507096; -.
DR Ensembl; ENST00000507153.2; ENSP00000489975.1; ENSG00000250298.6.
DR Ensembl; ENST00000638719.4; ENSP00000491450.2; ENSG00000250298.6.
DR GeneID; 100507096; -.
DR KEGG; hsa:100507096; -.
DR MANE-Select; ENST00000638719.4; ENSP00000491450.2; NM_001195138.2; NP_001182067.1.
DR CTD; 100507096; -.
DR DisGeNET; 100507096; -.
DR GeneCards; GIMD1; -.
DR HGNC; HGNC:44141; GIMD1.
DR HPA; ENSG00000250298; Tissue enriched (intestine).
DR neXtProt; NX_P0DJR0; -.
DR OpenTargets; ENSG00000250298; -.
DR VEuPathDB; HostDB:ENSG00000250298; -.
DR GeneTree; ENSGT00530000069080; -.
DR InParanoid; P0DJR0; -.
DR OMA; WKDFTAV; -.
DR BioGRID-ORCS; 100507096; 12 hits in 188 CRISPR screens.
DR Pharos; P0DJR0; Tdark.
DR PRO; PR:P0DJR0; -.
DR Proteomes; UP000005640; Chromosome 4.
DR RNAct; P0DJR0; protein.
DR Bgee; ENSG00000250298; Expressed in duodenum and 9 other tissues.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR006703; G_AIG1.
DR InterPro; IPR045058; GIMA/IAN/Toc.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR10903; PTHR10903; 1.
DR Pfam; PF04548; AIG1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS51720; G_AIG1; 1.
PE 2: Evidence at transcript level;
KW GTP-binding; Nucleotide-binding; Reference proteome.
FT CHAIN 1..217
FT /note="GTPase IMAP family member GIMD1"
FT /id="PRO_0000419199"
FT DOMAIN 6..217
FT /note="AIG1-type G"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01057"
FT BINDING 15..23
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 36
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 148..150
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
SQ SEQUENCE 217 AA; 24463 MW; AAC33C2D1A799989 CRC64;
MTDPNKMIIN LALFGMTQSG KSSAGNILLG STDFHSSFAP CSVTTCCSLG RSCHLHSFMR
RGGLEVALQV QVLDTPGYPH SRLSKKYVKQ EVKEALAHHF GQGGLHLALL VQRADVPFCG
QEVTDPVQMI QELLGHAWMN YTAILFTHAE KIEEAGLTED KYLHEASDTL KTLLNSIQHK
YVFQYKKGKS LNEQRMKILE RIMEFIKENC YQVLTFK