GIP1L_ARATH
ID GIP1L_ARATH Reviewed; 575 AA.
AC A4FVR1; Q9LFZ2; Q9LG31;
DT 17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
DT 17-APR-2007, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=GBF-interacting protein 1-like {ECO:0000303|PubMed:24484953};
DE Short=Protein GIP1-like {ECO:0000303|PubMed:24484953};
GN Name=GIP1L {ECO:0000303|PubMed:24484953};
GN OrderedLocusNames=At1g55820 {ECO:0000312|Araport:AT1G55820};
GN ORFNames=F14J16.6 {ECO:0000312|EMBL:AAF79311.1},
GN F20N2.19 {ECO:0000312|EMBL:AAF79498.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=19376835; DOI=10.1104/pp.109.138677;
RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA Grossmann J., Gruissem W., Baginsky S.;
RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT chloroplast kinase substrates and phosphorylation networks.";
RL Plant Physiol. 150:889-903(2009).
RN [5]
RP SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX PubMed=24484953; DOI=10.1016/j.jplph.2013.11.003;
RA Lee H.W., Park J.H., Park M.Y., Kim J.;
RT "GIP1 may act as a coactivator that enhances transcriptional activity of
RT LBD18 in Arabidopsis.";
RL J. Plant Physiol. 171:14-18(2014).
CC -!- FUNCTION: May act as a transcriptional coactivator of LOB domain-
CC containing proteins. {ECO:0000250|UniProtKB:Q8VZS6}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:24484953}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems and flowers.
CC {ECO:0000269|PubMed:24484953}.
CC -!- SIMILARITY: Belongs to the GIP1 family.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF79311.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAF79498.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC002304; AAF79311.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC002328; AAF79498.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE33303.1; -; Genomic_DNA.
DR EMBL; BT030359; ABO38772.1; -; mRNA.
DR PIR; F96599; F96599.
DR RefSeq; NP_175978.2; NM_104459.4.
DR AlphaFoldDB; A4FVR1; -.
DR IntAct; A4FVR1; 1.
DR iPTMnet; A4FVR1; -.
DR PaxDb; A4FVR1; -.
DR PRIDE; A4FVR1; -.
DR ProteomicsDB; 220765; -.
DR EnsemblPlants; AT1G55820.1; AT1G55820.1; AT1G55820.
DR GeneID; 842032; -.
DR Gramene; AT1G55820.1; AT1G55820.1; AT1G55820.
DR KEGG; ath:AT1G55820; -.
DR Araport; AT1G55820; -.
DR TAIR; locus:2012015; AT1G55820.
DR eggNOG; ENOG502RQC4; Eukaryota.
DR HOGENOM; CLU_482657_0_0_1; -.
DR InParanoid; A4FVR1; -.
DR OMA; FVKETCC; -.
DR OrthoDB; 345523at2759; -.
DR PhylomeDB; A4FVR1; -.
DR PRO; PR:A4FVR1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A4FVR1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR InterPro; IPR044277; GIP1.
DR InterPro; IPR009719; GIP1_N.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR46775; PTHR46775; 2.
DR Pfam; PF06972; GIP1_N; 1.
DR SUPFAM; SSF46934; SSF46934; 1.
PE 1: Evidence at protein level;
KW Nucleus; Reference proteome.
FT CHAIN 1..575
FT /note="GBF-interacting protein 1-like"
FT /id="PRO_0000435636"
FT REGION 66..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 229..296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..171
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..244
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..271
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 575 AA; 61877 MW; EA9530C15839548A CRC64;
MSSSDGGSSR VSIPYHLRKT LQKIREYTGK QHSDEDIFAV YKDSFNDPHE TAQKLLFLDT
FHEVRSKREK KKEPIVPVTQ PSGRGGRRNF ASSNSYQGSG RNASFKRENG ANHVTRGSRT
AQPATNKASN ITVPNETKVS GPASIPSEVS NHKAQDDPSL ISASRCSSKS DQAIEIETAS
KQGKNQSLPK PDVSEQSHVT FPFHLQVAKG LQNGLTFGSF DSNFVKEVSS SNGASGGYDS
NFESSHGTGD DERESSPTTN GITGVASARE ETSTVSEDKD YGISNSATGA EPVVHSDHIV
PPVEEVPKEE ALSNTETHQI AYGQEAPLSV FGLVPSLSAI GQPVNTEAAE TQPGNSNSPP
ISLVSYPPDQ SSIAAATQQT NFLRQQYPPN FFPYGYYSPY YMPPPYIHQF LSPNGIPQQS
YFPQGAALTA PSHAKPVDNT ENPPTTNPYL HTSPMVASSI PSTTTLNSIH SEEKASHLTE
SAAAWIGQGF GNLQVNPMYN LAYQGQPLGF PVVQAGHGGL MGMHQPTQPM AAASTTYQTL
PPPPHTTTAM GEPIGHPHIA YQQPQAALTN WVNNY
