GLAB_AKKM8
ID GLAB_AKKM8 Reviewed; 794 AA.
AC B2UNU8;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 03-AUG-2022, entry version 63.
DE RecName: Full=Alpha-1,3-galactosidase B;
DE EC=3.2.1.n1 {ECO:0000250|UniProtKB:Q5LGZ8};
DE EC=3.2.1.n2 {ECO:0000250|UniProtKB:Q5LGZ8};
DE AltName: Full=Exo-alpha-galactosidase B;
DE EC=3.2.1.22 {ECO:0000250|UniProtKB:Q5LGZ8};
DE Flags: Precursor;
GN Name=glaB; OrderedLocusNames=Amuc_0480;
OS Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC
OS 81048 / CCUG 64013 / CIP 107961 / Muc).
OC Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales;
OC Akkermansiaceae; Akkermansia.
OX NCBI_TaxID=349741;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP
RC 107961 / Muc;
RX PubMed=21390229; DOI=10.1371/journal.pone.0016876;
RA van Passel M.W., Kant R., Zoetendal E.G., Plugge C.M., Derrien M.,
RA Malfatti S.A., Chain P.S., Woyke T., Palva A., de Vos W.M., Smidt H.;
RT "The genome of Akkermansia muciniphila, a dedicated intestinal mucin
RT degrader, and its use in exploring intestinal metagenomes.";
RL PLoS ONE 6:E16876-E16876(2011).
CC -!- FUNCTION: Alpha-galactosidase. Removes both branched alpha-1,3-linked
CC galactose residues of blood group B antigens and linear alpha-1,3-
CC linked galactose structures. {ECO:0000250|UniProtKB:Q5LGZ8}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal, non-reducing branched (1->3)-alpha-D-
CC galactosidic residues, producing free D-galactose.; EC=3.2.1.n1;
CC Evidence={ECO:0000250|UniProtKB:Q5LGZ8};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal, non-reducing linear (1->3)-alpha-D-
CC galactosidic residues, producing free D-galactose.; EC=3.2.1.n2;
CC Evidence={ECO:0000250|UniProtKB:Q5LGZ8};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal, non-reducing alpha-D-galactose
CC residues in alpha-D-galactosides, including galactose
CC oligosaccharides, galactomannans and galactolipids.; EC=3.2.1.22;
CC Evidence={ECO:0000250|UniProtKB:Q5LGZ8};
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 110 family. B subfamily.
CC {ECO:0000305}.
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DR EMBL; CP001071; ACD04318.1; -; Genomic_DNA.
DR AlphaFoldDB; B2UNU8; -.
DR SMR; B2UNU8; -.
DR STRING; 349741.Amuc_0480; -.
DR CAZy; CBM51; Carbohydrate-Binding Module Family 51.
DR CAZy; GH110; Glycoside Hydrolase Family 110.
DR EnsemblBacteria; ACD04318; ACD04318; Amuc_0480.
DR KEGG; amu:Amuc_0480; -.
DR eggNOG; COG5434; Bacteria.
DR HOGENOM; CLU_017693_0_0_0; -.
DR OMA; ATHFSGC; -.
DR OrthoDB; 1217730at2; -.
DR BioCyc; AMUC349741:G1GBX-528-MON; -.
DR Proteomes; UP000001031; Chromosome.
DR GO; GO:0052692; F:raffinose alpha-galactosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0008152; P:metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.160.20.10; -; 2.
DR Gene3D; 2.60.120.1060; -; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR013222; Glyco_hyd_98_carb-bd.
DR InterPro; IPR038637; NPCBM_sf.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF08305; NPCBM; 1.
DR SMART; SM00776; NPCBM; 1.
DR SUPFAM; SSF49785; SSF49785; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
PE 3: Inferred from homology;
KW Glycosidase; Hydrolase; Reference proteome; Repeat; Signal.
FT SIGNAL 1..57
FT /evidence="ECO:0000255"
FT CHAIN 58..794
FT /note="Alpha-1,3-galactosidase B"
FT /id="PRO_0000348475"
FT REPEAT 468..499
FT /note="PbH1 1"
FT REPEAT 609..631
FT /note="PbH1 2"
FT REPEAT 632..654
FT /note="PbH1 3"
FT REPEAT 665..686
FT /note="PbH1 4"
FT REPEAT 707..728
FT /note="PbH1 5"
SQ SEQUENCE 794 AA; 87763 MW; CDEF0FFFD10D164A CRC64;
MEGNLSFSLM EASGRSIFFL IEGIREQSIK NMFSRMFSWS FVVAACLAGL FPAQSQGEEK
AAQSGTIAVK VPASSLLMTR QETGETRLDR SFSNAGLSIG GKKYATGIGT HATSMIPLPV
PENPKVLRLE GACGIDDGAD GDGSVEFRVM SGSEVLWSSG VMRRGMAAKK FSIPVAENGI
RHLYLMADRV DNNSYDHADW VDLAWKTTGS GQGMKGAVVN ASEFGMVPGV RKDQGPALRA
AVSALRRQGG GVLNIPRGIY HFYPEGALNM SFHISNHDQP LIHPVCVPLA DLRNVRVEGN
GSLFLFHGKV VPLLVMDSEN VSINRLSVDY ERSWCTEARV VKTDDRFTEV EIDKKAYPYE
IRNNRFVFQG KGWEEGMGSC MAFEKGTGHI IANTSDIGWN GHVEPLGGSR LRLSWNLRQK
GIKPGDTLVL RNYNRPHPGC VVYRARKTSL NDVSLHQSSG MALLVQRSED FHMKGGGVMV
RKGTGRVHTA GADATHFSNT RGGIVVEKAL FEGMMDDAIN VHSTCLGVME VVDSHTLKCK
YMHRQAVGFE VFLPGEKIRF INGPTLEPGG TATVKTAVKK NSAEMVITVE EPLPSSVRAG
DAVENADFYP SVVFRNNIVR NNRARGSLFT TPERVLVEGN LFDHSSGSAI LLAGDAQGWY
ESGACHEVVI RKNTFINNLT SRYQFTNAII SIYPEVKQLD RQRDYYHRNV LIENNVFKTF
DVPLLFAIST DNLKFINNKV IYNDEFKGWG QKPFQFRRCA NILIKDNKVL PPRTWTLEDC
KLENTPSDQV RFGG