GLB1_GLYDI
ID GLB1_GLYDI Reviewed; 147 AA.
AC P02216;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1990, sequence version 2.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Globin, major monomeric component;
OS Glycera dibranchiata (Bloodworm).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta;
OC Errantia; Phyllodocida; Glyceridae; Glycera.
OX NCBI_TaxID=6350;
RN [1]
RP PROTEIN SEQUENCE.
RX PubMed=5063466; DOI=10.1016/s0021-9258(19)45280-0;
RA Imamura T., Baldwin T.O., Riggs A.;
RT "The amino acid sequence of the monomeric hemoglobin component from the
RT bloodworm, Glyat liver.";
RL J. Biol. Chem. 247:2785-2797(1972).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS).
RX PubMed=4855197; DOI=10.1016/s0021-9258(19)42484-8;
RA Padlan E.A., Love W.E.;
RT "Three-dimensional structure of hemoglobin from the polychaete annelid,
RT Glycera dibranchiata, at 2.5-A resolution.";
RL J. Biol. Chem. 249:4067-4078(1974).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.5 ANGSTROMS), AND SEQUENCE REVISION.
RX PubMed=2585515; DOI=10.1016/0022-2836(89)90297-0;
RA Arents G.A., Love W.E.;
RT "Glycera dibranchiata hemoglobin. Structure and refinement at 1.5-A
RT resolution.";
RL J. Mol. Biol. 210:149-161(1989).
CC -!- SUBUNIT: Monomer.
CC -!- MISCELLANEOUS: X-ray crystallographic analysis indicates that the D
CC helix is absent, Leu-58 replaces the distal His (of myoglobin E7), His-
CC 90 binds covalently to the heme iron, the F helix has several more
CC residues than in mammalian globins, and Pro-105 (G7) causes a bend in
CC the G helix.
CC -!- SIMILARITY: Belongs to the globin family. {ECO:0000255|PROSITE-
CC ProRule:PRU00238}.
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DR PIR; A02538; GGNW1B.
DR PDB; 1HBG; X-ray; 1.50 A; A=1-147.
DR PDB; 1JF3; X-ray; 1.40 A; A=1-147.
DR PDB; 1JL7; X-ray; 1.40 A; A=1-147.
DR PDB; 2HBG; X-ray; 1.50 A; A=1-147.
DR PDBsum; 1HBG; -.
DR PDBsum; 1JF3; -.
DR PDBsum; 1JL7; -.
DR PDBsum; 2HBG; -.
DR AlphaFoldDB; P02216; -.
DR SMR; P02216; -.
DR EvolutionaryTrace; P02216; -.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0019825; F:oxygen binding; IEA:InterPro.
DR GO; GO:0005344; F:oxygen carrier activity; IEA:UniProtKB-KW.
DR CDD; cd01040; Mb-like; 1.
DR Gene3D; 1.10.490.10; -; 1.
DR InterPro; IPR000971; Globin.
DR InterPro; IPR009050; Globin-like_sf.
DR InterPro; IPR012292; Globin/Proto.
DR InterPro; IPR044399; Mb-like_M.
DR Pfam; PF00042; Globin; 1.
DR SUPFAM; SSF46458; SSF46458; 1.
DR PROSITE; PS01033; GLOBIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Heme; Iron; Metal-binding;
KW Oxygen transport; Transport.
FT CHAIN 1..147
FT /note="Globin, major monomeric component"
FT /id="PRO_0000052500"
FT BINDING 90
FT /ligand="heme b"
FT /ligand_id="ChEBI:CHEBI:60344"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT SITE 105
FT /note="Causes a bend in the G helix"
FT CONFLICT 20
FT /note="A -> N (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 34
FT /note="F -> H (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 54
FT /note="G -> A (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 57
FT /note="A -> D (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
FT CONFLICT 100
FT /note="A -> G (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
FT HELIX 4..18
FT /evidence="ECO:0007829|PDB:1JF3"
FT TURN 19..23
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 24..37
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 39..41
FT /evidence="ECO:0007829|PDB:1JF3"
FT TURN 42..46
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 53..71
FT /evidence="ECO:0007829|PDB:1JF3"
FT TURN 72..74
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 76..89
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 90..92
FT /evidence="ECO:0007829|PDB:1JF3"
FT STRAND 94..96
FT /evidence="ECO:0007829|PDB:1HBG"
FT HELIX 100..102
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 103..118
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 119..121
FT /evidence="ECO:0007829|PDB:1JF3"
FT HELIX 124..145
FT /evidence="ECO:0007829|PDB:1JF3"
SQ SEQUENCE 147 AA; 14902 MW; 980558C06D881C43 CRC64;
GLSAAQRQVI AATWKDIAGA DNGAGVGKDC LIKFLSAHPQ MAAVFGFSGA SDPGVAALGA
KVLAQIGVAV SHLGDEGKMV AQMKAVGVRH KGYGNKHIKA QYFEPLGASL LSAMEHRIGG
KMNAAAKDAW AAAYADISGA LISGLQS