GLB4_LUMTE
ID GLB4_LUMTE Reviewed; 151 AA.
AC P13579;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1990, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Extracellular globin-4;
DE AltName: Full=Erythrocruorin;
DE AltName: Full=Globin A;
DE AltName: Full=Globin IV;
OS Lumbricus terrestris (Common earthworm).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Clitellata;
OC Oligochaeta; Crassiclitellata; Lumbricina; Lumbricidae; Lumbricinae;
OC Lumbricus.
OX NCBI_TaxID=6398;
RN [1]
RP PROTEIN SEQUENCE.
RX PubMed=3360792; DOI=10.1016/s0021-9258(18)68671-5;
RA Fushitani K., Matsuura M.S.A., Riggs A.F.;
RT "The amino acid sequences of chains a, b, and c that form the trimer
RT subunit of the extracellular hemoglobin from Lumbricus terrestris.";
RL J. Biol. Chem. 263:6502-6517(1988).
RN [2]
RP PROTEIN SEQUENCE OF 1-10.
RX PubMed=8597573; DOI=10.1016/0167-4838(95)00214-6;
RA Fushitani K., Higashiyama K., Asao M., Hosokawa K.;
RT "Characterization of the constituent polypeptides of the extracellular
RT hemoglobin from Lumbricus terrestris: heterogeneity and discovery of a new
RT linker chain L4.";
RL Biochim. Biophys. Acta 1292:273-280(1996).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) IN COMPLEX WITH HEME, AND SUBUNIT.
RX PubMed=15504406; DOI=10.1016/j.jmb.2004.08.094;
RA Strand K., Knapp J.E., Bhyravbhatla B., Royer W.E. Jr.;
RT "Crystal structure of the hemoglobin dodecamer from Lumbricus
RT erythrocruorin: allosteric core of giant annelid respiratory complexes.";
RL J. Mol. Biol. 344:119-134(2004).
CC -!- SUBUNIT: The extracellular hemoglobin of the earthworm consists of 12
CC subunits that have a hexagonal bilayer structure with a molecular
CC weight near 3.8 million. Each one-twelfth subunit is composed primarily
CC of disulfide linked trimers (chains A, B, and C) and monomers (chain
CC D). {ECO:0000269|PubMed:15504406}.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the globin family. {ECO:0000255|PROSITE-
CC ProRule:PRU00238}.
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DR PIR; A28151; A28151.
DR PDB; 1X9F; X-ray; 2.60 A; A/E/I=1-151.
DR PDB; 2GTL; X-ray; 3.50 A; A/E/I=1-151.
DR PDB; 4V93; EM; 8.10 A; A2/A3/A7/AA/AE/AF/AJ/AK/AO/AP/AT/AU/AY/AZ/Ad/Ae/Ai/Aj/An/Ao/As/At/Ax/Ay=5-151, B1/B6/BD/BI/BN/BS/BX/Bc/Bh/Bm/Br/Bw=1-151.
DR PDB; 5M3L; EM; 3.80 A; A/E/I=1-151.
DR PDBsum; 1X9F; -.
DR PDBsum; 2GTL; -.
DR PDBsum; 4V93; -.
DR PDBsum; 5M3L; -.
DR AlphaFoldDB; P13579; -.
DR SMR; P13579; -.
DR DIP; DIP-29122N; -.
DR IntAct; P13579; 1.
DR EvolutionaryTrace; P13579; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0005833; C:hemoglobin complex; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0019825; F:oxygen binding; IEA:InterPro.
DR GO; GO:0005344; F:oxygen carrier activity; IEA:UniProtKB-KW.
DR CDD; cd01040; Mb-like; 1.
DR Gene3D; 1.10.490.10; -; 1.
DR InterPro; IPR000971; Globin.
DR InterPro; IPR009050; Globin-like_sf.
DR InterPro; IPR012292; Globin/Proto.
DR InterPro; IPR014610; Haemoglobin_extracell.
DR InterPro; IPR044399; Mb-like_M.
DR Pfam; PF00042; Globin; 1.
DR PIRSF; PIRSF036517; Ext_hemo; 1.
DR SUPFAM; SSF46458; SSF46458; 1.
DR PROSITE; PS01033; GLOBIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Disulfide bond; Heme; Iron;
KW Metal-binding; Oxygen transport; Secreted; Transport.
FT CHAIN 1..151
FT /note="Extracellular globin-4"
FT /id="PRO_0000052515"
FT BINDING 101
FT /ligand="heme b"
FT /ligand_id="ChEBI:CHEBI:60344"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="proximal binding residue"
FT DISULFID 6
FT /note="Interchain (with chain III)"
FT /evidence="ECO:0000250"
FT DISULFID 7..138
FT /evidence="ECO:0000250"
FT DISULFID 129
FT /note="Interchain (with chain I)"
FT /evidence="ECO:0000250"
FT HELIX 9..22
FT /evidence="ECO:0007829|PDB:1X9F"
FT STRAND 26..28
FT /evidence="ECO:0007829|PDB:1X9F"
FT HELIX 29..45
FT /evidence="ECO:0007829|PDB:1X9F"
FT HELIX 47..53
FT /evidence="ECO:0007829|PDB:1X9F"
FT TURN 54..59
FT /evidence="ECO:0007829|PDB:1X9F"
FT HELIX 65..81
FT /evidence="ECO:0007829|PDB:1X9F"
FT TURN 82..85
FT /evidence="ECO:0007829|PDB:1X9F"
FT HELIX 87..102
FT /evidence="ECO:0007829|PDB:1X9F"
FT HELIX 109..126
FT /evidence="ECO:0007829|PDB:1X9F"
FT STRAND 127..129
FT /evidence="ECO:0007829|PDB:2GTL"
FT HELIX 132..146
FT /evidence="ECO:0007829|PDB:1X9F"
FT TURN 147..149
FT /evidence="ECO:0007829|PDB:1X9F"
SQ SEQUENCE 151 AA; 17525 MW; 4A2C7421F0DCBC2F CRC64;
ADDEDCCSYE DRREIRHIWD DVWSSSFTDR RVAIVRAVFD DLFKHYPTSK ALFERVKIDE
PESGEFKSHL VRVANGLDLL INLLDDTLVL QSHLGHLADQ HIQRKGVTKE YFRGIGEAFA
RVLPQVLSCF NVDAWNRCFH RLVARIAKDL P