GLB_PAREP
ID GLB_PAREP Reviewed; 148 AA.
AC P80721;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Globin-3;
DE AltName: Full=Myoglobin;
OS Paramphistomum epiclitum.
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda;
OC Digenea; Plagiorchiida; Pronocephalata; Paramphistomoidea;
OC Paramphistomidae; Paramphistomum.
OX NCBI_TaxID=54403;
RN [1]
RP PROTEIN SEQUENCE OF 2-148, AND MASS SPECTROMETRY.
RX PubMed=9006947; DOI=10.1074/jbc.272.5.2992;
RA Rashid A.R., van Hauwaert M.-L., Haque M., Siddiqi A.H., Lasters I.,
RA de Maeyer M., Griffon N., Marden M.C., Dewilde S., Clauwaert J.,
RA Vinogradov S.N., Moens L.;
RT "Trematode myoglobins, functional molecules with a distal tyrosine.";
RL J. Biol. Chem. 272:2992-2999(1997).
RN [2]
RP STRUCTURE BY NMR OF THE HEME POCKET RESIDUES.
RX PubMed=9006948; DOI=10.1074/jbc.272.5.3000;
RA Zhang W., Rashid K.A., Haque M., Siddiqi A.H., Vinogradov S.N., Moens L.,
RA la Mar G.N.;
RT "Solution of 1H NMR structure of the heme cavity in the oxygen-avid
RT myoglobin from the trematode Paramphistomum epiclitum.";
RL J. Biol. Chem. 272:3000-3006(1997).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.17 ANGSTROMS) IN COMPLEX WITH HEME.
RX PubMed=11399085; DOI=10.1006/jmbi.2001.4731;
RA Pesce A., Dewilde S., Kiger L., Milani M., Ascenzi P., Marden M.C.,
RA Van Hauwaert M.L., Vanfleteren J., Moens L., Bolognesi M.;
RT "Very high resolution structure of a trematode hemoglobin displaying a
RT TyrB10-TyrE7 heme distal residue pair and high oxygen affinity.";
RL J. Mol. Biol. 309:1153-1164(2001).
CC -!- FUNCTION: Oxygen binding protein.
CC -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:11399085}.
CC -!- MASS SPECTROMETRY: Mass=16643.2; Mass_error=1.58; Method=Electrospray;
CC Evidence={ECO:0000269|PubMed:9006947};
CC -!- MISCELLANEOUS: This globin lacks one of the heme-binding histidine
CC residues found in most other globins (replaced by a tyrosine) but has
CC an extreme oxygen-avidity and high oxidation resistance despite this
CC change.
CC -!- SIMILARITY: Belongs to the globin family. {ECO:0000305}.
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DR PIR; A58345; A58345.
DR PDB; 1H97; X-ray; 1.17 A; A/B=2-148.
DR PDB; 1KFR; X-ray; 1.85 A; A=2-148.
DR PDBsum; 1H97; -.
DR PDBsum; 1KFR; -.
DR AlphaFoldDB; P80721; -.
DR SMR; P80721; -.
DR EvolutionaryTrace; P80721; -.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0019825; F:oxygen binding; IEA:InterPro.
DR GO; GO:0005344; F:oxygen carrier activity; IEA:UniProtKB-KW.
DR CDD; cd01040; Mb-like; 1.
DR Gene3D; 1.10.490.10; -; 1.
DR InterPro; IPR000971; Globin.
DR InterPro; IPR009050; Globin-like_sf.
DR InterPro; IPR012292; Globin/Proto.
DR InterPro; IPR011406; Globin_trematode.
DR InterPro; IPR044399; Mb-like_M.
DR Pfam; PF00042; Globin; 1.
DR PIRSF; PIRSF036488; Myoglobin_tremt; 1.
DR SUPFAM; SSF46458; SSF46458; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Heme; Iron; Metal-binding;
KW Oxygen transport; Transport.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..148
FT /note="Globin-3"
FT /id="PRO_0000052466"
FT BINDING 99
FT /ligand="heme"
FT /ligand_id="ChEBI:CHEBI:30413"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="proximal binding residue"
FT HELIX 5..15
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 16..18
FT /evidence="ECO:0007829|PDB:1H97"
FT STRAND 19..21
FT /evidence="ECO:0007829|PDB:1KFR"
FT HELIX 22..39
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 41..46
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 48..50
FT /evidence="ECO:0007829|PDB:1H97"
FT TURN 55..57
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 58..60
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 62..79
FT /evidence="ECO:0007829|PDB:1H97"
FT TURN 80..83
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 85..97
FT /evidence="ECO:0007829|PDB:1H97"
FT TURN 98..101
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 106..123
FT /evidence="ECO:0007829|PDB:1H97"
FT STRAND 124..126
FT /evidence="ECO:0007829|PDB:1H97"
FT HELIX 127..145
FT /evidence="ECO:0007829|PDB:1H97"
SQ SEQUENCE 148 AA; 16770 MW; BA19B66A3E5E5F0D CRC64;
MTLTKHEQDI LLKELGPHVD TPAHIVETGL GAYHALFTAH PQYIIHFSRL EGHTIENVMQ
SEGIKHYART LTEAIVHMLK EISNDAEVKK IAAQYGKDHT SRKVTKDEFM SGEPIFTKYF
QNLVKDAEGK AAVEKFLKHV FPMMAAEI