GLD27_ARATH
ID GLD27_ARATH Reviewed; 327 AA.
AC Q9FN15;
DT 25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic {ECO:0000303|PubMed:23043051};
DE Flags: Precursor;
GN Name=CGLD27 {ECO:0000303|PubMed:23043051};
GN OrderedLocusNames=At5g67370 {ECO:0000312|Araport:AT5G67370};
GN ORFNames=K8K14.9 {ECO:0000312|EMBL:BAB09022.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, AND INDUCTION BY IRON
RP DEFICIENCY.
RC STRAIN=cv. Col-4;
RX PubMed=23043051; DOI=10.1105/tpc.112.102491;
RA Urzica E.I., Casero D., Yamasaki H., Hsieh S.I., Adler L.N.,
RA Karpowicz S.J., Blaby-Haas C.E., Clarke S.G., Loo J.A., Pellegrini M.,
RA Merchant S.S.;
RT "Systems and trans-system level analysis identifies conserved iron
RT deficiency responses in the plant lineage.";
RL Plant Cell 24:3921-3948(2012).
RN [5]
RP INDUCTION BY IRON DEFICIENCY.
RX PubMed=23888164; DOI=10.3389/fpls.2013.00276;
RA Rodriguez-Celma J., Pan I.C., Li W., Lan P., Buckhout T.J., Schmidt W.;
RT "The transcriptional response of Arabidopsis leaves to Fe deficiency.";
RL Front. Plant Sci. 4:276-276(2013).
CC -!- FUNCTION: Required for growth in low iron conditions.
CC {ECO:0000269|PubMed:23043051}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Multi-pass membrane
CC protein {ECO:0000255}. Plastid, chloroplast {ECO:0000255}.
CC -!- TISSUE SPECIFICITY: Mostly expressed in seeds, leaves and flowers, and,
CC to a lower extent, in roots. {ECO:0000269|PubMed:23043051}.
CC -!- INDUCTION: Accumulates progressively upon iron deficiency.
CC {ECO:0000269|PubMed:23043051, ECO:0000269|PubMed:23888164}.
CC -!- DISRUPTION PHENOTYPE: Stronger growth defect in iron-deficient
CC conditions. {ECO:0000269|PubMed:23043051}.
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DR EMBL; AB007645; BAB09022.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98333.1; -; Genomic_DNA.
DR EMBL; AF360127; AAK25837.1; -; mRNA.
DR EMBL; AY051028; AAK93705.1; -; mRNA.
DR RefSeq; NP_201538.1; NM_126137.4.
DR AlphaFoldDB; Q9FN15; -.
DR STRING; 3702.AT5G67370.1; -.
DR PaxDb; Q9FN15; -.
DR PRIDE; Q9FN15; -.
DR ProteomicsDB; 247254; -.
DR EnsemblPlants; AT5G67370.1; AT5G67370.1; AT5G67370.
DR GeneID; 836872; -.
DR Gramene; AT5G67370.1; AT5G67370.1; AT5G67370.
DR KEGG; ath:AT5G67370; -.
DR Araport; AT5G67370; -.
DR TAIR; locus:2158197; AT5G67370.
DR eggNOG; ENOG502QS25; Eukaryota.
DR HOGENOM; CLU_071172_0_0_1; -.
DR InParanoid; Q9FN15; -.
DR OMA; ISGATWI; -.
DR OrthoDB; 1566706at2759; -.
DR PhylomeDB; Q9FN15; -.
DR PRO; PR:Q9FN15; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FN15; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:1990641; P:response to iron ion starvation; IMP:UniProtKB.
DR InterPro; IPR009631; CGLD27-like.
DR PANTHER; PTHR34214; PTHR34214; 1.
DR Pfam; PF06799; DUF1230; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Membrane; Plastid; Reference proteome; Transit peptide;
KW Transmembrane; Transmembrane helix.
FT TRANSIT 1..59
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 60..327
FT /note="Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS
FT 27, chloroplastic"
FT /evidence="ECO:0000255"
FT /id="PRO_0000442037"
FT TRANSMEM 119..139
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 148..168
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 225..245
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 66..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..88
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 327 AA; 36114 MW; 1CEC05AA8A7EB15B CRC64;
MLRLIVNYPL IPKISHRVCS NSSSKLGSYY DSSSIIKYGG ISDVVGKKQE LFLSVSVKAV
EDKGNNGGGS MSFSGQSWDP SSEIEVPSDQ RPVNEYSSLK EGMLYSWGEL GPSEFFIRLG
GLWLVTFTVL GVPVAAASFN PSREPLRFIL AAGTGTLFLV SLIVLRIYLG WSYVGDRLLS
AVIPYEESGW YDGQMWVKPP EVLARDRLLG SYKVKPVIKM LKQTLIGTGA LLVSAFVLFV
FATPVEDFFK TTLGSTENQP EVSISRTSNK FNIRKEQLLR LPVDVVTDDD LAAAAAEAAD
GRPVYCRDRY YRALAGGQYC KWEDLVK
