GLNB_ORYSJ
ID GLNB_ORYSJ Reviewed; 212 AA.
AC Q6AUR2; A0A0P0WHM7;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Nitrogen regulatory protein P-II homolog;
DE AltName: Full=Protein PII-like;
DE Flags: Precursor;
GN Name=GLB; Synonyms=GLB1; OrderedLocusNames=Os05g0133100, LOC_Os05g04220;
GN ORFNames=OsJ_17013, OSJNBa0077L08.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Sasanishiki; TISSUE=Leaf;
RX PubMed=15653795; DOI=10.1093/pcp/pch199;
RA Sugiyama K., Hayakawa T., Kudo T., Ito T., Yamaya T.;
RT "Interaction of N-acetylglutamate kinase with a PII-like protein in rice.";
RL Plant Cell Physiol. 45:1768-1778(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare; TISSUE=Green leaf;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Participates in sensing carbon and organic nitrogen status
CC and regulates some steps of primary carbon and nitrogen metabolism.
CC {ECO:0000250}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255|PROSITE-
CC ProRule:PRU00675}.
CC -!- SIMILARITY: Belongs to the P(II) protein family. {ECO:0000255|PROSITE-
CC ProRule:PRU00675}.
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DR EMBL; AB119279; BAD88531.1; -; mRNA.
DR EMBL; AC118288; AAT85171.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF16476.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS92130.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE62226.1; -; Genomic_DNA.
DR EMBL; AK068407; BAG90896.1; -; mRNA.
DR EMBL; AK099152; BAG93955.1; -; mRNA.
DR RefSeq; XP_015637847.1; XM_015782361.1.
DR AlphaFoldDB; Q6AUR2; -.
DR SMR; Q6AUR2; -.
DR STRING; 4530.OS05T0133100-01; -.
DR PaxDb; Q6AUR2; -.
DR PRIDE; Q6AUR2; -.
DR EnsemblPlants; Os05t0133100-01; Os05t0133100-01; Os05g0133100.
DR GeneID; 4337720; -.
DR Gramene; Os05t0133100-01; Os05t0133100-01; Os05g0133100.
DR KEGG; osa:4337720; -.
DR eggNOG; ENOG502RUKA; Eukaryota.
DR HOGENOM; CLU_082268_1_0_1; -.
DR InParanoid; Q6AUR2; -.
DR OMA; PWRVPLV; -.
DR OrthoDB; 1537660at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q6AUR2; OS.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0010307; F:acetylglutamate kinase regulator activity; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IBA:GO_Central.
DR GO; GO:0030234; F:enzyme regulator activity; IBA:GO_Central.
DR GO; GO:0000287; F:magnesium ion binding; IEA:EnsemblPlants.
DR GO; GO:0009718; P:anthocyanin-containing compound biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0042304; P:regulation of fatty acid biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0006808; P:regulation of nitrogen utilization; IBA:GO_Central.
DR GO; GO:0009416; P:response to light stimulus; IEA:EnsemblPlants.
DR GO; GO:0009744; P:response to sucrose; IEA:EnsemblPlants.
DR Gene3D; 3.30.70.120; -; 1.
DR InterPro; IPR002187; N-reg_PII.
DR InterPro; IPR011322; N-reg_PII-like_a/b.
DR InterPro; IPR015867; N-reg_PII/ATP_PRibTrfase_C.
DR InterPro; IPR017918; N-reg_PII_CS.
DR PANTHER; PTHR30115; PTHR30115; 1.
DR Pfam; PF00543; P-II; 1.
DR PRINTS; PR00340; PIIGLNB.
DR SMART; SM00938; P-II; 1.
DR SUPFAM; SSF54913; SSF54913; 1.
DR PROSITE; PS00638; PII_GLNB_CTER; 1.
DR PROSITE; PS51343; PII_GLNB_DOM; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Chloroplast; Magnesium; Metal-binding; Nitrogen fixation;
KW Nucleotide-binding; Plastid; Reference proteome; Transcription;
KW Transcription regulation; Transit peptide.
FT TRANSIT 1..68
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 69..212
FT /note="Nitrogen regulatory protein P-II homolog"
FT /id="PRO_0000401369"
FT REGION 1..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 117..121
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
FT BINDING 119
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 170..173
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 212 AA; 22701 MW; FC463F14B6FD4433 CRC64;
MSSPATAAAA AASCGVLRHH HPPASPRPPP TTTTTTSRLL LASRSRGLQR PLRVNHAPPR
RLPPTAARAQ SAAAAGYQPE SEFYKVEAIL RPWRVPYVSS GLLQMGIRGV TVSDVRGFGA
QGGSTERHEG SEFAEDTFID KVKMEIVVSK DQVEAVVDKI IEKARTGEIG DGKIFLIPVS
DVIRIRTGER GERAERMAGG LADKLSSAMP IS
