GLTD_CERSP
ID GLTD_CERSP Reviewed; 413 AA.
AC O08340;
DT 13-OCT-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=Putative glutamate synthase [NADPH] small chain;
DE EC=1.4.1.13;
DE AltName: Full=Glutamate synthase subunit beta;
DE Short=GLTS beta chain;
DE AltName: Full=NADPH-GOGAT;
GN Name=gltD;
OS Cereibacter sphaeroides (Rhodobacter sphaeroides).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Cereibacter.
OX NCBI_TaxID=1063;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=601;
RX PubMed=12219208;
RA Lu T., Wu Y.Q., Song H.Y.;
RT "The nucleotide Sequence of gltD gene encoding the small subunit of
RT Rhodobacter sphaeroides glutamate synthase.";
RL Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao 29:294-302(1997).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + L-glutamine
CC + NADPH; Xref=Rhea:RHEA:15501, ChEBI:CHEBI:15378, ChEBI:CHEBI:16810,
CC ChEBI:CHEBI:29985, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:58359; EC=1.4.1.13;
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250};
CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000250};
CC -!- PATHWAY: Amino-acid biosynthesis; L-glutamate biosynthesis via GLT
CC pathway; L-glutamate from 2-oxoglutarate and L-glutamine (NADP(+)
CC route): step 1/1.
CC -!- PATHWAY: Energy metabolism; nitrogen metabolism.
CC -!- SUBUNIT: Aggregate of 4 catalytic active heterodimers, consisting of a
CC large and a small subunit. {ECO:0000250}.
CC -!- MISCELLANEOUS: Glutamine binds to the large subunit and transfers the
CC amido group to 2-oxo-glutamate that apparently binds to the small
CC subunit. {ECO:0000250}.
CC -!- CAUTION: Lacks the 4Fe-4S ferredoxin-type domain found in GltD
CC orthologs. {ECO:0000305}.
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DR EMBL; Y12481; CAA73084.1; -; Genomic_DNA.
DR PIR; JE0142; JE0142.
DR AlphaFoldDB; O08340; -.
DR SMR; O08340; -.
DR PRIDE; O08340; -.
DR UniPathway; UPA00045; -.
DR UniPathway; UPA00634; UER00689.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0004355; F:glutamate synthase (NADPH) activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0097054; P:L-glutamate biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 1.10.1060.10; -; 1.
DR Gene3D; 3.50.50.60; -; 2.
DR InterPro; IPR028261; DPD_II.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR006006; GltD-like.
DR InterPro; IPR009051; Helical_ferredxn.
DR PANTHER; PTHR42783:SF1; PTHR42783:SF1; 1.
DR Pfam; PF14691; Fer4_20; 1.
DR Pfam; PF07992; Pyr_redox_2; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Glutamate biosynthesis; Iron; Iron-sulfur;
KW Metal-binding; NADP; Oxidoreductase.
FT CHAIN 1..413
FT /note="Putative glutamate synthase [NADPH] small chain"
FT /id="PRO_0000386547"
FT BINDING 33
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000255"
FT BINDING 37
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000255"
FT BINDING 43
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000255"
FT BINDING 47
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000255"
SQ SEQUENCE 413 AA; 44407 MW; A177838E418A2254 CRC64;
MAKEPMLQFV KMARETPEKR PRSLRSQDFH EICGRICPQD RLCEGNCVIE QSGHGTVTIG
AVEKYITDTA WENGWVVPGK PAYERSESVG IIGAGPGGLA AADALRRAGL QVTVYDRYDR
AGGLLTYGIP GFKLEKDVVA RRVEQLEQAG VQFVLNCNVG EDLSFDAIRG QHDAVLIATG
VYKQRDLAAP GVGSAGVVQA LSYLTASNRR SFGDEVDDDG LDASGKRVVV IGGGDTAMDC
VRTAIRQGAT SVKCLYRRDR ANMPGSQREV ANAEEEGVEF VWLSAPRGFI AGDAVEGVIV
QKMRLGEPDA TGRQMPEIIE GADYVEPADL AIMALGFEPE DLPTLWGVPD LTVTRWGTIK
ADFRTHATSL PGVYAVGDIV RGASLVVWAI RDGRDAAQSI LDYLAQPAVV AAE