GLUA2_ORYSJ
ID GLUA2_ORYSJ Reviewed; 499 AA.
AC P07730; P07731; Q0IXU2; Q3HR07; Q7G2V6; Q7G8K6;
DT 01-APR-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1988, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Glutelin type-A 2;
DE AltName: Full=Glutelin type II;
DE Contains:
DE RecName: Full=Glutelin type-A 2 acidic chain;
DE Contains:
DE RecName: Full=Glutelin type-A 2 basic chain;
DE Flags: Precursor;
GN Name=GLUA2; Synonyms=GLUA-2, GT1;
GN OrderedLocusNames=Os10g0400200, LOC_Os10g26060; ORFNames=OSJNBa0050N08.16;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Takaiwa F., Kikuchi S., Oono K.;
RT "A rice glutelin gene family - A major type of glutelin mRNAs can be
RT divided into two classes.";
RL Mol. Gen. Genet. 208:15-22(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Mangetsumochi;
RA Takaiwa F., Ebinuma H., Kikuchi S., Oono K.;
RT "Nucleotide sequence of a rice glutelin gene.";
RL FEBS Lett. 221:43-47(1987).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS ILE-320; THR-342 AND
RP ALA-454.
RC STRAIN=cv. Nipponbare;
RA Abe K., Emori Y., Kawasaki H., Kondo H., Suzuki K., Arai S.;
RT "Organization and primary sequence of multiple genes encoding type II mRNA
RT species of rice prepro-glutelin.";
RL Agric. Biol. Chem. 53:2969-2973(1989).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. M201; TISSUE=Coleoptile;
RX PubMed=2745459; DOI=10.1016/s0021-9258(18)63895-5;
RA Okita T.W., Hwang Y.S., Hnilo J., Kim W.T., Aryan A.P., Larson R.,
RA Krishnan H.B.;
RT "Structure and expression of the rice glutelin multigene family.";
RL J. Biol. Chem. 264:12573-12581(1989).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Wuyunjing 8; TISSUE=Leaf;
RA Liu Q.Q., Sun S.S.M.;
RT "Nucleotide sequence of rice glutelin Gt1 gene.";
RL Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Xiangqing, and cv. Zhonghua 11; TISSUE=Leaf;
RA Zhang W., Yin Z.M., Lu H., Liu L.N., Li H.Q., Li J.Y.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice chromosome
RT 10.";
RL Science 300:1566-1569(2003).
RN [8]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [9]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [10]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [11]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 274-499.
RC STRAIN=cv. Newbonnet;
RA Wang C.S., Shastri K., Wen L., Huang J.K., Sonthayanon B.,
RA Muthukrishnan S., Reeck G.R.;
RT "Heterogeneity in cDNA clones encoding rice glutelin.";
RL FEBS Lett. 222:135-138(1987).
RN [12]
RP PROTEIN SEQUENCE OF 25-40; 76-90; 125-140 AND 141-150.
RC STRAIN=cv. Nipponbare; TISSUE=Endosperm, and Panicle;
RX PubMed=14681440; DOI=10.1093/nar/gkh020;
RA Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.;
RT "Rice proteome database based on two-dimensional polyacrylamide gel
RT electrophoresis: its status in 2003.";
RL Nucleic Acids Res. 32:D388-D392(2004).
CC -!- FUNCTION: Seed storage protein.
CC -!- SUBUNIT: Hexamer; each subunit is composed of an acidic and a basic
CC chain derived from a single precursor and linked by a disulfide bond.
CC -!- SIMILARITY: Belongs to the 11S seed storage protein (globulins) family.
CC {ECO:0000305}.
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DR EMBL; X05663; CAA29151.1; -; mRNA.
DR EMBL; X05664; CAA29152.1; -; mRNA.
DR EMBL; D00584; BAA00462.1; -; Genomic_DNA.
DR EMBL; Y00687; CAA68683.1; -; Genomic_DNA.
DR EMBL; M28156; AAA50315.1; -; Genomic_DNA.
DR EMBL; AY585231; AAS98732.1; -; Genomic_DNA.
DR EMBL; DQ195678; ABA39424.1; -; Genomic_DNA.
DR EMBL; DQ203186; ABA46747.1; -; Genomic_DNA.
DR EMBL; AC021891; AAK50415.1; -; Genomic_DNA.
DR EMBL; DP000086; AAP53644.1; -; Genomic_DNA.
DR EMBL; AP008216; BAF26456.1; -; Genomic_DNA.
DR EMBL; AP014966; BAT10732.1; -; Genomic_DNA.
DR EMBL; X06149; CAA29507.1; -; mRNA.
DR PIR; A34332; A34332.
DR PIR; JQ0112; FWRZ2.
DR RefSeq; XP_015614159.1; XM_015758673.1.
DR AlphaFoldDB; P07730; -.
DR SMR; P07730; -.
DR STRING; 4530.OS10T0400200-01; -.
DR PaxDb; P07730; -.
DR PRIDE; P07730; -.
DR EnsemblPlants; Os10t0400200-01; Os10t0400200-01; Os10g0400200.
DR GeneID; 4348563; -.
DR Gramene; Os10t0400200-01; Os10t0400200-01; Os10g0400200.
DR KEGG; osa:4348563; -.
DR eggNOG; ENOG502QU1J; Eukaryota.
DR HOGENOM; CLU_026341_2_0_1; -.
DR InParanoid; P07730; -.
DR OMA; QRPSWET; -.
DR OrthoDB; 603461at2759; -.
DR Proteomes; UP000000763; Chromosome 10.
DR Proteomes; UP000059680; Chromosome 10.
DR ExpressionAtlas; P07730; baseline and differential.
DR Genevisible; P07730; OS.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR022379; 11S_seedstore_CS.
DR InterPro; IPR006044; 11S_seedstore_pln.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF00190; Cupin_1; 2.
DR PRINTS; PR00439; 11SGLOBULIN.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; SSF51182; 1.
DR PROSITE; PS00305; 11S_SEED_STORAGE; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Disulfide bond; Reference proteome;
KW Seed storage protein; Signal; Storage protein.
FT SIGNAL 1..24
FT /evidence="ECO:0000269|PubMed:14681440"
FT CHAIN 25..306
FT /note="Glutelin type-A 2 acidic chain"
FT /id="PRO_0000032048"
FT CHAIN 307..499
FT /note="Glutelin type-A 2 basic chain"
FT /id="PRO_0000032049"
FT DOMAIN 51..248
FT /note="Cupin type-1 1"
FT /evidence="ECO:0000255"
FT DOMAIN 319..468
FT /note="Cupin type-1 2"
FT /evidence="ECO:0000255"
FT REGION 280..300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 46..79
FT /evidence="ECO:0000250"
FT DISULFID 122..313
FT /note="Interchain (between acidic and basic chains)"
FT /evidence="ECO:0000255"
FT VARIANT 320
FT /note="N -> I"
FT /evidence="ECO:0000269|Ref.3"
FT VARIANT 342
FT /note="S -> T"
FT /evidence="ECO:0000269|Ref.3"
FT VARIANT 454
FT /note="D -> A"
FT /evidence="ECO:0000269|Ref.3"
FT CONFLICT 36
FT /note="Q -> R (in Ref. 6; ABA46747)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 499 AA; 56306 MW; 6F7F0C556C9CBB78 CRC64;
MASINRPIVF FTVCLFLLCD GSLAQQLLGQ STSQWQSSRR GSPRGCRFDR LQAFEPIRSV
RSQAGTTEFF DVSNELFQCT GVSVVRRVIE PRGLLLPHYT NGASLVYIIQ GRGITGPTFP
GCPETYQQQF QQSGQAQLTE SQSQSHKFKD EHQKIHRFRQ GDVIALPAGV AHWCYNDGEV
PVVAIYVTDI NNGANQLDPR QRDFLLAGNK RNPQAYRREV EEWSQNIFSG FSTELLSEAF
GISNQVARQL QCQNDQRGEI VRVERGLSLL QPYASLQEQE QGQMQSREHY QEGGYQQSQY
GSGCPNGLDE TFCTMRVRQN IDNPNRADTY NPRAGRVTNL NSQNFPILNL VQMSAVKVNL
YQNALLSPFW NINAHSIVYI TQGRAQVQVV NNNGKTVFNG ELRRGQLLIV PQHYVVVKKA
QREGCAYIAF KTNPNSMVSH IAGKSSIFRA LPTDVLANAY RISREEAQRL KHNRGDEFGA
FTPLQYKSYQ DVYNVAESS
