GLUA3_ORYSJ
ID GLUA3_ORYSJ Reviewed; 496 AA.
AC Q09151; Q38G57; Q40688; Q75I63;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 2.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Glutelin type-A 3;
DE Contains:
DE RecName: Full=Glutelin type-A 3 acidic chain;
DE Contains:
DE RecName: Full=Glutelin type-A 3 basic chain;
DE Flags: Precursor;
GN Name=GLUA3; Synonyms=GLUA-3, GT22, GT3;
GN OrderedLocusNames=Os03g0427300, LOC_Os03g31360; ORFNames=OSJNBa0083F15.19;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RC STRAIN=cv. M201; TISSUE=Seed;
RX PubMed=2745459; DOI=10.1016/s0021-9258(18)63895-5;
RA Okita T.W., Hwang Y.S., Hnilo J., Kim W.T., Aryan A.P., Larson R.,
RA Krishnan H.B.;
RT "Structure and expression of the rice glutelin multigene family.";
RL J. Biol. Chem. 264:12573-12581(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Mangetsumochi; TISSUE=Immature seed;
RX PubMed=1840621; DOI=10.1266/jjg.66.161;
RA Takaiwa F., Oono K.;
RT "Genomic DNA sequences of two new genes for new storage protein glutelin in
RT rice.";
RL Jpn. J. Genet. 66:161-171(1991).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Seed storage protein.
CC -!- SUBUNIT: Hexamer; each subunit is composed of an acidic and a basic
CC chain derived from a single precursor and linked by a disulfide bond.
CC -!- DEVELOPMENTAL STAGE: Levels increase early during seed development,
CC reach maximum 10 days after flowering and then decrease.
CC -!- SIMILARITY: Belongs to the 11S seed storage protein (globulins) family.
CC {ECO:0000305}.
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DR EMBL; M28158; AAA50314.2; -; Genomic_DNA.
DR EMBL; M28159; AAA50316.1; -; mRNA.
DR EMBL; X54313; CAA38211.1; -; Genomic_DNA.
DR EMBL; AC133398; AAR01757.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS84792.1; -; Genomic_DNA.
DR EMBL; AK107271; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; C34332; C34332.
DR PIR; D34332; D34332.
DR PIR; S18745; S18745.
DR RefSeq; XP_015632411.1; XM_015776925.1.
DR AlphaFoldDB; Q09151; -.
DR SMR; Q09151; -.
DR STRING; 4530.OS03T0427300-01; -.
DR PaxDb; Q09151; -.
DR PRIDE; Q09151; -.
DR EnsemblPlants; Os03t0427300-01; Os03t0427300-01; Os03g0427300.
DR GeneID; 4333164; -.
DR Gramene; Os03t0427300-01; Os03t0427300-01; Os03g0427300.
DR KEGG; osa:4333164; -.
DR eggNOG; ENOG502QU1J; Eukaryota.
DR HOGENOM; CLU_026341_2_0_1; -.
DR InParanoid; Q09151; -.
DR OMA; STRAMEY; -.
DR OrthoDB; 603461at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q09151; baseline and differential.
DR Genevisible; Q09151; OS.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR022379; 11S_seedstore_CS.
DR InterPro; IPR006044; 11S_seedstore_pln.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF00190; Cupin_1; 2.
DR PRINTS; PR00439; 11SGLOBULIN.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; SSF51182; 1.
DR PROSITE; PS00305; 11S_SEED_STORAGE; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Reference proteome; Seed storage protein; Signal;
KW Storage protein.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..305
FT /note="Glutelin type-A 3 acidic chain"
FT /id="PRO_0000032050"
FT CHAIN 306..496
FT /note="Glutelin type-A 3 basic chain"
FT /id="PRO_0000032051"
FT DOMAIN 50..248
FT /note="Cupin type-1 1"
FT /evidence="ECO:0000255"
FT DOMAIN 318..467
FT /note="Cupin type-1 2"
FT /evidence="ECO:0000255"
FT DISULFID 45..78
FT /evidence="ECO:0000250"
FT DISULFID 121..312
FT /note="Interchain (between acidic and basic chains)"
FT /evidence="ECO:0000255"
FT CONFLICT 11
FT /note="S -> F (in Ref. 2; CAA38211)"
FT /evidence="ECO:0000305"
FT CONFLICT 15
FT /note="L -> F (in Ref. 1; AAA50314/AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 100
FT /note="N -> D (in Ref. 6; AK107271)"
FT /evidence="ECO:0000305"
FT CONFLICT 135
FT /note="D -> A (in Ref. 1; AAA50314)"
FT /evidence="ECO:0000305"
FT CONFLICT 169
FT /note="V -> L (in Ref. 1; AAA50314)"
FT /evidence="ECO:0000305"
FT CONFLICT 178..181
FT /note="DAPI -> YMKV (in Ref. 1; AAA50314/AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 194
FT /note="N -> H (in Ref. 1; AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 212
FT /note="G -> S (in Ref. 1; AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 263
FT /note="V -> VV (in Ref. 1; AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 268
FT /note="S -> P (in Ref. 1; AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 271
FT /note="Q -> H (in Ref. 1; AAA50316)"
FT /evidence="ECO:0000305"
FT CONFLICT 324..327
FT /note="NLAD -> KRVE (in Ref. 1; AAA50314)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 496 AA; 56015 MW; 89A9CCCEFFA7096E CRC64;
MATIKFPIVF SVVCLFLLCN GSLAQLLSQS TSQWQSSRRG SPRECRFDRL QAFEPIRTVR
SQAGTTEFFD VSNELFQCTG VFVVRRVIEP RGLLLPHYSN GATLVYVIQG RGITGPTFPG
CPETYQQQFQ QSEQDQQLEG QSQSHKFRDE HQKIHRFQQG DVVALPAGVA HWCYNDGDAP
IVAIYVTDIY NSANQLDPRH RDFFLAGNNK IGQQLYRYEA RDNSKNVFGG FSVELLSEAL
GISSGVARQL QCQNDQRGEI VRVEHGLSLL QPYASLQEQQ QEQVQSRDYG QTQYQQKQLQ
GSCSNGLDET FCTMRVRQNI DNPNLADTYN PRAGRITYLN GQKFPILNLV QMSAVKVNLY
QNALLSPFWN INAHSVVYIT QGRARVQVVN NNGKTVFDGE LRRGQLLIIP QHHVVIKKAQ
REGCSYIALK TNPDSMVSHM AGKNSIFRAL PDDVVANAYR ISREEARRLK HNRGDELGVF
TPSHAYKSYQ DISVSA
