GLUB1_ORYSJ
ID GLUB1_ORYSJ Reviewed; 499 AA.
AC P14323; Q02898; Q6KA41;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 3.
DT 25-MAY-2022, entry version 120.
DE RecName: Full=Glutelin type-B 1;
DE Contains:
DE RecName: Full=Glutelin type-B 1 acidic chain;
DE Contains:
DE RecName: Full=Glutelin type-B 1 basic chain;
DE Flags: Precursor;
GN Name=GluB1-A; Synonyms=GluB-1;
GN OrderedLocusNames=Os02g0249800 {ECO:0000312|EMBL:BAS77905.1},
GN LOC_Os02g15169 {ECO:0000305};
GN ORFNames=OJ1113_G05.6 {ECO:0000312|EMBL:BAD19150.1},
GN OSJNBa0011N12.36 {ECO:0000312|EMBL:BAD19803.1};
GN and
GN Name=GLUB1-B; Synonyms=GLUB-1;
GN OrderedLocusNames=Os02g0249900 {ECO:0000312|EMBL:BAS77906.1},
GN LOC_Os02g15178 {ECO:0000305};
GN ORFNames=OJ1113_G05.4 {ECO:0000312|EMBL:BAD19149.1},
GN OSJNBa0011N12.34 {ECO:0000312|EMBL:BAD19802.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Mangetsumochi; TISSUE=Seed;
RX PubMed=2726459; DOI=10.1093/nar/17.8.3289;
RA Takaiwa F., Kikuchi S., Oono K.;
RT "The complete nucleotide sequence of new type cDNA coding for rice storage
RT protein glutelin.";
RL Nucleic Acids Res. 17:3289-3289(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=2587279; DOI=10.1093/nar/17.22.9490;
RA Wen L., Huang J.K., Johnson B.H., Reeck G.R.;
RT "Nucleotide sequence of a cDNA that encodes a rice glutelin.";
RL Nucleic Acids Res. 17:9490-9490(1989).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Mangetsumochi; TISSUE=Seed;
RX PubMed=1680490; DOI=10.1007/bf00037068;
RA Takaiwa F., Oono K., Wing D., Kato A.;
RT "Sequence of three members and expression of a new major subfamily of
RT glutelin genes from rice.";
RL Plant Mol. Biol. 17:875-885(1991).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Seed storage protein.
CC -!- SUBUNIT: Hexamer; each subunit is composed of an acidic and a basic
CC chain derived from a single precursor and linked by a disulfide bond.
CC -!- DEVELOPMENTAL STAGE: It begins to accumulate 6 days after flowering and
CC reaches a maximum level at 14 days.
CC -!- SIMILARITY: Belongs to the 11S seed storage protein (globulins) family.
CC {ECO:0000305}.
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DR EMBL; X14568; CAA32706.1; -; mRNA.
DR EMBL; X15833; CAA33838.1; -; mRNA.
DR EMBL; X54314; CAA38212.1; -; Genomic_DNA.
DR EMBL; AP004018; BAD19150.1; -; Genomic_DNA.
DR EMBL; AP004018; BAD19149.1; -; Genomic_DNA.
DR EMBL; AP005511; BAD19803.1; -; Genomic_DNA.
DR EMBL; AP005511; BAD19802.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS77905.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS77906.1; -; Genomic_DNA.
DR PIR; S07640; S07640.
DR PIR; S17762; S17762.
DR RefSeq; XP_015625460.1; XM_015769974.1.
DR RefSeq; XP_015625461.1; XM_015769975.1.
DR AlphaFoldDB; P14323; -.
DR SMR; P14323; -.
DR IntAct; P14323; 2.
DR STRING; 4530.OS02T0249800-01; -.
DR PaxDb; P14323; -.
DR PRIDE; P14323; -.
DR EnsemblPlants; Os02t0249800-01; Os02t0249800-01; Os02g0249800.
DR EnsemblPlants; Os02t0249900-01; Os02t0249900-01; Os02g0249900.
DR GeneID; 4328883; -.
DR GeneID; 4328884; -.
DR Gramene; Os02t0249800-01; Os02t0249800-01; Os02g0249800.
DR Gramene; Os02t0249900-01; Os02t0249900-01; Os02g0249900.
DR KEGG; osa:4328883; -.
DR KEGG; osa:4328884; -.
DR eggNOG; ENOG502QU1J; Eukaryota.
DR HOGENOM; CLU_026341_2_0_1; -.
DR InParanoid; P14323; -.
DR OMA; CTIKARI; -.
DR OrthoDB; 603461at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR ExpressionAtlas; P14323; baseline and differential.
DR Genevisible; P14323; OS.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR022379; 11S_seedstore_CS.
DR InterPro; IPR006044; 11S_seedstore_pln.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF00190; Cupin_1; 2.
DR PRINTS; PR00439; 11SGLOBULIN.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; SSF51182; 1.
DR PROSITE; PS00305; 11S_SEED_STORAGE; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Reference proteome; Seed storage protein; Signal;
KW Storage protein.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..302
FT /note="Glutelin type-B 1 acidic chain"
FT /evidence="ECO:0000250"
FT /id="PRO_0000032056"
FT CHAIN 303..499
FT /note="Glutelin type-B 1 basic chain"
FT /evidence="ECO:0000250"
FT /id="PRO_0000032057"
FT DOMAIN 50..247
FT /note="Cupin type-1 1"
FT /evidence="ECO:0000255"
FT DOMAIN 315..464
FT /note="Cupin type-1 2"
FT /evidence="ECO:0000255"
FT REGION 467..499
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 483..499
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 45..78
FT /evidence="ECO:0000250"
FT DISULFID 121..309
FT /note="Interchain (between acidic and basic chains)"
FT /evidence="ECO:0000255"
FT CONFLICT 175..176
FT /note="AP -> RH (in Ref. 1; CAA32706 and 3; CAA38212)"
FT /evidence="ECO:0000305"
FT CONFLICT 252
FT /note="Q -> P (in Ref. 1; CAA32706 and 3; CAA38212)"
FT /evidence="ECO:0000305"
FT CONFLICT 401
FT /note="G -> A (in Ref. 2; CAA33838)"
FT /evidence="ECO:0000305"
FT CONFLICT 432
FT /note="A -> T (in Ref. 1; CAA32706 and 3; CAA38212)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 499 AA; 56551 MW; A8945F8C3D14F5B0 CRC64;
MASSVFSRFS IYFCVLLLCH GSMAQLFNPS TNPWHSPRQG SFRECRFDRL QAFEPLRKVR
SEAGVTEYFD EKNELFQCTG TFVIRRVIQP QGLLVPRYTN IPGVVYIIQG RGSMGLTFPG
CPATYQQQFQ QFSSQGQSQS QKFRDEHQKI HQFRQGDIVA LPAGVAHWFY NDGDAPIVAV
YVYDVNNNAN QLEPRQKEFL LAGNNNRAQQ QQVYGSSIEQ HSGQNIFSGF GVEMLSEALG
INAVAAKRLQ SQNDQRGEII HVKNGLQLLK PTLTQQQEQA QAQDQYQQVQ YSERQQTSSR
WNGLEENFCT IKVRVNIENP SRADSYNPRA GRITSVNSQK FPILNLIQMS ATRVNLYQNA
ILSPFWNVNA HSLVYMIQGR SRVQVVSNFG KTVFDGVLRP GQLLIIPQHY AVLKKAEREG
CQYIAIKTNA NAFVSHLAGK NSVFRALPVD VVANAYRISR EQARSLKNNR GEEHGAFTPR
FQQQYYPGLS NESESETSE
