GLUB4_ORYSJ
ID GLUB4_ORYSJ Reviewed; 500 AA.
AC P14614; Q546X7; Q7GBB0;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 1.
DT 25-MAY-2022, entry version 121.
DE RecName: Full=Glutelin type-B 4;
DE Contains:
DE RecName: Full=Glutelin type-B 4 acidic chain;
DE Contains:
DE RecName: Full=Glutelin type-B 4 basic chain;
DE Flags: Precursor;
GN Name=GLUB4; Synonyms=GLUB-4;
GN OrderedLocusNames=Os02g0268300, LOC_Os02g16830; ORFNames=P0693E08.16;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare; TISSUE=Seed;
RA Masumura T., Kidzu K., Sugiyama Y., Mitsukawa N., Hibino T., Tanaka K.,
RA Fujii S.;
RT "Nucleotide sequence of a cDNA encoding a major rice glutelin.";
RL Plant Mol. Biol. 12:723-725(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=12782736; DOI=10.1105/tpc.011452;
RA Kusaba M., Miyahara K., Iida S., Fukuoka H., Takano T., Sassa H.,
RA Nishimura M., Nishio T.;
RT "Low glutelin content1: a dominant mutation that suppresses the glutelin
RT multigene family via RNA silencing in rice.";
RL Plant Cell 15:1455-1467(2003).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Jiang S., Wan J., Xu L.;
RT "New rice glutelin gene GluB-4.";
RL Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP PROTEIN SEQUENCE OF 25-41; 68-84 AND 199-215, AND TISSUE SPECIFICITY.
RC STRAIN=cv. Nipponbare; TISSUE=Endosperm;
RX PubMed=14681440; DOI=10.1093/nar/gkh020;
RA Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.;
RT "Rice proteome database based on two-dimensional polyacrylamide gel
RT electrophoresis: its status in 2003.";
RL Nucleic Acids Res. 32:D388-D392(2004).
CC -!- FUNCTION: Seed storage protein.
CC -!- SUBUNIT: Hexamer; each subunit is composed of an acidic and a basic
CC chain derived from a single precursor and linked by a disulfide bond.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in endosperm (at protein level).
CC {ECO:0000269|PubMed:14681440}.
CC -!- SIMILARITY: Belongs to the 11S seed storage protein (globulins) family.
CC {ECO:0000305}.
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DR EMBL; X14393; CAA32566.1; -; mRNA.
DR EMBL; AB093593; BAC77348.1; -; Genomic_DNA.
DR EMBL; AF537221; AAM97692.1; -; Genomic_DNA.
DR EMBL; AP005428; BAD28628.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS78036.1; -; Genomic_DNA.
DR PIR; S05443; S05443.
DR RefSeq; XP_015626321.1; XM_015770835.1.
DR AlphaFoldDB; P14614; -.
DR SMR; P14614; -.
DR IntAct; P14614; 4.
DR STRING; 4530.OS02T0268300-00; -.
DR PaxDb; P14614; -.
DR EnsemblPlants; Os02t0268300-00; Os02t0268300-00; Os02g0268300.
DR GeneID; 4328969; -.
DR Gramene; Os02t0268300-00; Os02t0268300-00; Os02g0268300.
DR KEGG; osa:4328969; -.
DR eggNOG; ENOG502QU1J; Eukaryota.
DR HOGENOM; CLU_026341_2_0_1; -.
DR InParanoid; P14614; -.
DR OMA; QNQEDNR; -.
DR OrthoDB; 603461at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR ExpressionAtlas; P14614; baseline and differential.
DR Genevisible; P14614; OS.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR022379; 11S_seedstore_CS.
DR InterPro; IPR006044; 11S_seedstore_pln.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF00190; Cupin_1; 2.
DR PRINTS; PR00439; 11SGLOBULIN.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; SSF51182; 1.
DR PROSITE; PS00305; 11S_SEED_STORAGE; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Disulfide bond; Reference proteome;
KW Seed storage protein; Signal; Storage protein.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..303
FT /note="Glutelin type-B 4 acidic chain"
FT /evidence="ECO:0000250"
FT /id="PRO_0000032054"
FT CHAIN 304..500
FT /note="Glutelin type-B 4 basic chain"
FT /evidence="ECO:0000250"
FT /id="PRO_0000032055"
FT DOMAIN 50..245
FT /note="Cupin type-1 1"
FT /evidence="ECO:0000255"
FT DOMAIN 316..465
FT /note="Cupin type-1 2"
FT /evidence="ECO:0000255"
FT REGION 481..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 45..78
FT /evidence="ECO:0000250"
FT DISULFID 121..310
FT /note="Interchain (between acidic and basic chains)"
FT /evidence="ECO:0000255"
SQ SEQUENCE 500 AA; 56818 MW; C31B22C1E3524011 CRC64;
MATIAFSRLS IYFCVLLLCH GSMAQLFGPN VNPWHNPRQG GFRECRFDRL QAFEPLRRVR
SEAGVTEYFD EKNEQFQCTG TFVIRRVIEP QGLLVPRYSN TPGMVYIIQG RGSMGLTFPG
CPATYQQQFQ QFLPEGQSQS QKFRDEHQKI HQFRQGDIVA LPAGVAHWFY NEGDAPVVAL
YVFDLNNNAN QLEPRQKEFL LAGNNNREQQ MYGRSIEQHS GQNIFSGFNN ELLSEALGVN
ALVAKRLQGQ NDQRGEIIRV KNGLKLLRPA FAQQQEQAQQ QEQAQAQYQV QYSEEQQPST
RCNGLDENFC TIKARLNIEN PSHADTYNPR AGRITRLNSQ KFPILNLVQL SATRVNLYQN
AILSPFWNVN AHSLVYIVQG HARVQVVSNL GKTVFNGVLR PGQLLIIPQH YVVLKKAEHE
GCQYISFKTN ANSMVSHLAG KNSIFRAMPV DVIANAYRIS REQARSLKNN RGEELGAFTP
RYQQQTYPGF SNESENEALE
