GLV2_ARATH
ID GLV2_ARATH Reviewed; 79 AA.
AC Q9FGF6;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Protein GOLVEN 2 {ECO:0000303|PubMed:23370719};
DE AltName: Full=CLAVATA3/ESR (CLE)-related protein CLEL9 {ECO:0000303|PubMed:22307643};
DE Short=CLE-Like protein 9 {ECO:0000303|PubMed:22307643};
DE AltName: Full=Root meristem growth factor 9 {ECO:0000303|PubMed:20798316};
DE Short=AtRGF9 {ECO:0000303|PubMed:20798316};
DE Contains:
DE RecName: Full=GLV2p {ECO:0000303|PubMed:22421050};
DE Flags: Precursor;
GN Name=GLV2 {ECO:0000303|PubMed:23370719};
GN Synonyms=CLEL9 {ECO:0000303|PubMed:22307643},
GN RGF9 {ECO:0000303|PubMed:20798316};
GN OrderedLocusNames=At5g64770 {ECO:0000312|Araport:AT5G64770};
GN ORFNames=MVP7.10 {ECO:0000312|EMBL:BAB10310.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP FUNCTION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20798316; DOI=10.1126/science.1191132;
RA Matsuzaki Y., Ogawa-Ohnishi M., Mori A., Matsubayashi Y.;
RT "Secreted peptide signals required for maintenance of root stem cell niche
RT in Arabidopsis.";
RL Science 329:1065-1067(2010).
RN [5]
RP FUNCTION, DISRUPTION PHENOTYPE, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE,
RP IDENTIFICATION BY MASS SPECTROMETRY, HYDROXYLATION AT PRO-75, SULFATION AT
RP TYR-67, AND INDUCTION BY AUXIN.
RX PubMed=22421050; DOI=10.1016/j.devcel.2012.02.002;
RA Whitford R., Fernandez A., Tejos R., Perez A.C., Kleine-Vehn J.,
RA Vanneste S., Drozdzecki A., Leitner J., Abas L., Aerts M., Hoogewijs K.,
RA Baster P., De Groodt R., Lin Y.-C., Storme V., Van de Peer Y., Beeckman T.,
RA Madder A., Devreese B., Luschnig C., Friml J., Hilson P.;
RT "GOLVEN secretory peptides regulate auxin carrier turnover during plant
RT gravitropic responses.";
RL Dev. Cell 22:678-685(2012).
RN [6]
RP FUNCTION, TISSUE SPECIFICITY, SUBCELLULAR LOCATION, NOMENCLATURE, AND GENE
RP FAMILY.
RC STRAIN=cv. Columbia;
RX PubMed=22307643; DOI=10.1073/pnas.1119864109;
RA Meng L., Buchanan B.B., Feldman L.J., Luan S.;
RT "CLE-like (CLEL) peptides control the pattern of root growth and lateral
RT root development in Arabidopsis.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:1760-1765(2012).
RN [7]
RP FUNCTION, TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RC STRAIN=cv. Columbia;
RX PubMed=23370719; DOI=10.1104/pp.112.206029;
RA Fernandez A., Drozdzecki A., Hoogewijs K., Nguyen A., Beeckman T.,
RA Madder A., Hilson P.;
RT "Transcriptional and functional classification of the GOLVEN/ROOT GROWTH
RT FACTOR/CLE-like signaling peptides reveals their role in lateral root and
RT hair formation.";
RL Plant Physiol. 161:954-970(2013).
CC -!- FUNCTION: [GLV2p]: Signaling peptide (root growth factor) that
CC regulates the pattern of root growth and lateral root development by
CC modulating the length and the number of cortical cells in the root
CC apical meristem (RAM), and the anticlinal asymmetric cell divisions in
CC lateral root initiation cells (PubMed:22307643, PubMed:23370719). Also
CC involved in the regulation of hypocotyl bending and root gravitropism,
CC probably by influencing the formation of auxin gradients
CC (PubMed:22421050). Maintains the postembryonic root stem cell niche
CC (PubMed:20798316). {ECO:0000269|PubMed:20798316,
CC ECO:0000269|PubMed:22307643, ECO:0000269|PubMed:22421050,
CC ECO:0000269|PubMed:23370719}.
CC -!- SUBUNIT: [GLV2p]: Binds to LRR receptor-like serine/threonine-protein
CC kinases to trigger their dimerization with SERK proteins and subsequent
CC signaling. {ECO:0000250|UniProtKB:Q9LI64}.
CC -!- SUBCELLULAR LOCATION: [GLV2p]: Secreted {ECO:0000305|PubMed:22307643}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum
CC {ECO:0000269|PubMed:22307643}. Note=The precursor is detected in the
CC endoplasmic reticulum probably during its processing.
CC {ECO:0000269|PubMed:22307643}.
CC -!- TISSUE SPECIFICITY: Expressed in siliques, stems, hypocotyls, shoot
CC apex, leaves, flowers and cotyledons, and, to a lower extent, in roots.
CC {ECO:0000269|PubMed:22307643, ECO:0000269|PubMed:22421050,
CC ECO:0000269|PubMed:23370719}.
CC -!- DEVELOPMENTAL STAGE: Absent from the primary root (PubMed:23370719).
CC Induced during lateral root formation after the emergence of the
CC primordium and in mature lateral roots (PubMed:23370719). Expressed
CC homogeneously across the cotyledon (PubMed:23370719). In leaves,
CC expressed in the whole lamina, with a stronger signal in the outer part
CC of the leaf (PubMed:23370719). Higher levels in younger leaves and
CC fades out as leaves expand (PubMed:23370719). Observed in the stem and
CC sepals, and in the gynoecium of the developing flowers, and later in
CC siliques (PubMed:23370719). During seedling gravitropic response,
CC restricted to the epidermis and cortex and enhanced at the lower side
CC of the reoriented hypocotyl (PubMed:22421050).
CC {ECO:0000269|PubMed:22421050, ECO:0000269|PubMed:23370719}.
CC -!- INDUCTION: Rapidly induced by auxin. {ECO:0000269|PubMed:22421050}.
CC -!- DISRUPTION PHENOTYPE: Reduced hypocotyl bending and dose-dependent
CC altered root gravitropism with an impaired formation of auxin
CC gradients, thus leading to an irregular waves root shape.
CC {ECO:0000269|PubMed:22421050}.
CC -!- MISCELLANEOUS: 'Golven' means irregular waves in Dutch.
CC {ECO:0000305|PubMed:22421050}.
CC -!- SIMILARITY: Belongs to the RGF family. {ECO:0000305}.
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DR EMBL; AB025637; BAB10310.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97949.1; -; Genomic_DNA.
DR EMBL; BT002516; AAO00876.1; -; mRNA.
DR EMBL; BT006500; AAP21308.1; -; mRNA.
DR RefSeq; NP_201282.1; NM_125873.3.
DR AlphaFoldDB; Q9FGF6; -.
DR STRING; 3702.AT5G64770.1; -.
DR PaxDb; Q9FGF6; -.
DR PRIDE; Q9FGF6; -.
DR EnsemblPlants; AT5G64770.1; AT5G64770.1; AT5G64770.
DR GeneID; 836598; -.
DR Gramene; AT5G64770.1; AT5G64770.1; AT5G64770.
DR KEGG; ath:AT5G64770; -.
DR Araport; AT5G64770; -.
DR TAIR; locus:2176060; AT5G64770.
DR HOGENOM; CLU_174364_0_0_1; -.
DR InParanoid; Q9FGF6; -.
DR OMA; RNIGGIM; -.
DR OrthoDB; 1580392at2759; -.
DR PhylomeDB; Q9FGF6; -.
DR PRO; PR:Q9FGF6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FGF6; baseline and differential.
DR Genevisible; Q9FGF6; AT.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0005615; C:extracellular space; ISS:UniProtKB.
DR GO; GO:0008083; F:growth factor activity; IDA:UniProtKB.
DR GO; GO:0005179; F:hormone activity; IDA:UniProtKB.
DR GO; GO:0030154; P:cell differentiation; IDA:UniProtKB.
DR GO; GO:0048527; P:lateral root development; IMP:TAIR.
DR GO; GO:0009958; P:positive gravitropism; IMP:TAIR.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; IDA:UniProtKB.
DR GO; GO:0009786; P:regulation of asymmetric cell division; ISS:UniProtKB.
DR GO; GO:2000012; P:regulation of auxin polar transport; IMP:TAIR.
DR GO; GO:2000023; P:regulation of lateral root development; IDA:UniProtKB.
DR GO; GO:0032880; P:regulation of protein localization; IDA:TAIR.
DR GO; GO:2000280; P:regulation of root development; IMP:UniProtKB.
DR GO; GO:0010082; P:regulation of root meristem growth; IDA:UniProtKB.
DR GO; GO:2000067; P:regulation of root morphogenesis; IDA:UniProtKB.
DR GO; GO:0009733; P:response to auxin; IEP:UniProtKB.
DR GO; GO:0022622; P:root system development; IMP:TAIR.
DR InterPro; IPR039337; GLV2.
DR PANTHER; PTHR33743; PTHR33743; 1.
PE 1: Evidence at protein level;
KW Differentiation; Endoplasmic reticulum; Growth factor; Hydroxylation;
KW Reference proteome; Secreted; Signal; Sulfation.
FT SIGNAL 1..26
FT /evidence="ECO:0000255"
FT PROPEP 27..65
FT /evidence="ECO:0000250|UniProtKB:Q3E880"
FT /id="PRO_0000401457"
FT PEPTIDE 66..78
FT /note="GLV2p"
FT /id="PRO_0000401458"
FT REGION 49..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 67
FT /note="Sulfotyrosine"
FT /evidence="ECO:0000269|PubMed:22421050"
FT MOD_RES 75
FT /note="Hydroxyproline"
FT /evidence="ECO:0000269|PubMed:22421050"
SQ SEQUENCE 79 AA; 8987 MW; 2A8F5114F52794AE CRC64;
MAIRVSHKSF LVALLLILFI SSPTQARSLR EVVRNRTLLV VEKSQESRKI RHEGGGSDVD
GLMDMDYNSA NKKRPIHNR