GLYCO_HIRRV
ID GLYCO_HIRRV Reviewed; 508 AA.
AC Q77SK0; Q76G52; Q82020;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 29-SEP-2021, entry version 66.
DE RecName: Full=Glycoprotein;
DE Flags: Precursor;
GN Name=G;
OS Hirame rhabdovirus (strain Korea/CA 9703/1997) (HIRRV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Rhabdoviridae; Gammarhabdovirinae;
OC Novirhabdovirus.
OX NCBI_TaxID=453457;
OH NCBI_TaxID=72011; Acanthopagrus schlegelii (Black porgy).
OH NCBI_TaxID=8255; Paralichthys olivaceus (Bastard halibut) (Hippoglossus olivaceus).
OH NCBI_TaxID=61084; Plecoglossus altivelis (Ayu).
OH NCBI_TaxID=160818; Sebastes inermis (Dark-banded rockfish).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=Isolate 8401H;
RX PubMed=8806175; DOI=10.1016/0168-1702(96)01300-7;
RA Bjorklund H.V., Higman K.H., Kurath G.;
RT "The glycoprotein genes and gene junctions of the fish rhabdoviruses spring
RT viremia of carp virus and hirame rhabdovirus: analysis of relationships
RT with other rhabdoviruses.";
RL Virus Res. 42:65-80(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=Isolate 8601H;
RX PubMed=15312663; DOI=10.1016/j.fsi.2004.04.012;
RA Takano T., Iwahori A., Hirono I., Aoki T.;
RT "Development of a DNA vaccine against hirame rhabdovirus and analysis of
RT the expression of immune-related genes after vaccination.";
RL Fish Shellfish Immunol. 17:367-374(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=15567027; DOI=10.1016/j.virusres.2004.06.004;
RA Kim D.H., Oh H.K., Eou J.I., Seo H.J., Kim S.K., Oh M.J., Nam S.W.,
RA Choi T.J.;
RT "Complete nucleotide sequence of the hirame rhabdovirus, a pathogen of
RT marine fish.";
RL Virus Res. 107:1-9(2005).
CC -!- FUNCTION: Attaches the virus to host cellular receptor, inducing
CC endocytosis of the virion. In the endosome, the acidic pH induces
CC conformational changes in the glycoprotein trimer, which trigger fusion
CC between virus and cell membrane (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homotrimer. Interacts with matrix protein (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion membrane {ECO:0000250}; Single-pass type I
CC membrane protein {ECO:0000250}.
CC -!- PTM: Glycosylated by host. Glycosylation is crucial for glycoprotein
CC export at the cell surface (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the novirhabdovirus glycoprotein family.
CC {ECO:0000305}.
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DR EMBL; U24073; AAB39502.1; -; Genomic_RNA.
DR EMBL; AB103462; BAC81968.1; -; Genomic_RNA.
DR EMBL; AF104985; AAQ73460.1; -; Genomic_RNA.
DR Proteomes; UP000008118; Genome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
DR InterPro; IPR001903; Rhabd_glycop.
DR InterPro; IPR002417; Spike_prot.
DR Pfam; PF00974; Rhabdo_glycop; 1.
DR PRINTS; PR00796; SPIKEPROTEIN.
PE 3: Inferred from homology;
KW Glycoprotein; Host-virus interaction; Membrane; Reference proteome; Signal;
KW Transmembrane; Transmembrane helix; Viral attachment to host cell;
KW Viral envelope protein; Virion; Virus entry into host cell.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..508
FT /note="Glycoprotein"
FT /id="PRO_0000299233"
FT TOPO_DOM 21..461
FT /note="Virion surface"
FT /evidence="ECO:0000255"
FT TRANSMEM 462..482
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 483..508
FT /note="Intravirion"
FT /evidence="ECO:0000255"
FT VARIANT 71
FT /note="R -> Q (in strain: Isolate 8401H and Isolate 8601H)"
FT VARIANT 217
FT /note="S -> P (in strain: Isolate 8601H)"
FT VARIANT 245
FT /note="L -> P (in strain: Isolate 8401H and Isolate 8601H)"
SQ SEQUENCE 508 AA; 56602 MW; 27B777D44C7D0E0D CRC64;
MDPRIMYYTV LLTTAARVYG QTIKPGVDSV SDQPTWANPL FTYPVDCPAA KLSKVSPSQL
RCPRIFDDEN RGLVAYPAVI RSLSVGNNLG DIHTQGEYVH KVLYRTTCST GFFGGQTIEK
ALVEMKLAPR EVGVYDTTTA SALYFPAPRC QWYTDNVHND LTFYYTTAKS VLRDPYTLGF
LDSDFIEGKC SKSPCQTHWS NVVWKGDSGV AACDTGSEIK GHIFVDKTSH HVVKATSYGH
HPWGLHRACM ITFCGKPWIR TDLGDLIAIE YNGGATLLAF PACKDTTVGM RGSLDDFAYL
DDLVKSSESR EECLEAHAEI IATNSVTPYL LSKFRSPHPG INDVYAMHDG SIYHGKCMTV
AIDEVSKDRR TYRAHQTSAF VAWGHPFGDE WGGFHGLHGN DTPVIPDLEK YVAQYKVSMM
DKMDIRPVPH PSVQILYNDT DTADITIRKI DSFDLQSLNW SFWPSLSALG GVPILLALVF
FLYCCMNRRP SMPAAPQEIP MYHLASRG