GLYT3_ARATH
ID GLYT3_ARATH Reviewed; 518 AA.
AC Q9FFN2;
DT 23-MAR-2010, integrated into UniProtKB/Swiss-Prot.
DT 23-MAR-2010, sequence version 2.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Probable glycosyltransferase At5g03795;
DE EC=2.4.-.-;
GN OrderedLocusNames=At5g03795; ORFNames=MED24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP IDENTIFICATION.
RX PubMed=18460606; DOI=10.1105/tpc.107.050906;
RA Jensen J.K., Sorensen S.O., Harholt J., Geshi N., Sakuragi Y., Moller I.,
RA Zandleven J., Bernal A.J., Jensen N.B., Sorensen C., Pauly M., Beldman G.,
RA Willats W.G., Scheller H.V.;
RT "Identification of a xylogalacturonan xylosyltransferase involved in pectin
RT biosynthesis in Arabidopsis.";
RL Plant Cell 20:1289-1302(2008).
CC -!- FUNCTION: May be involved in cell wall biosynthesis.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000250}; Single-
CC pass type II membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 47 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08605.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB005235; BAB08605.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED90655.1; -; Genomic_DNA.
DR RefSeq; NP_001031828.1; NM_001036751.2.
DR AlphaFoldDB; Q9FFN2; -.
DR STRING; 3702.AT5G03795.1; -.
DR CAZy; GT47; Glycosyltransferase Family 47.
DR PaxDb; Q9FFN2; -.
DR PRIDE; Q9FFN2; -.
DR ProteomicsDB; 247372; -.
DR EnsemblPlants; AT5G03795.1; AT5G03795.1; AT5G03795.
DR GeneID; 3770626; -.
DR Gramene; AT5G03795.1; AT5G03795.1; AT5G03795.
DR KEGG; ath:AT5G03795; -.
DR Araport; AT5G03795; -.
DR TAIR; locus:1009023450; AT5G03795.
DR eggNOG; KOG1021; Eukaryota.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_025166_1_4_1; -.
DR InParanoid; Q9FFN2; -.
DR OMA; PEWGVGD; -.
DR OrthoDB; 789556at2759; -.
DR PhylomeDB; Q9FFN2; -.
DR BioCyc; ARA:AT5G03795-MON; -.
DR PRO; PR:Q9FFN2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFN2; baseline and differential.
DR Genevisible; Q9FFN2; AT.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0006486; P:protein glycosylation; IEA:InterPro.
DR InterPro; IPR004263; Exostosin.
DR InterPro; IPR040911; Exostosin_GT47.
DR PANTHER; PTHR11062; PTHR11062; 1.
DR Pfam; PF03016; Exostosin; 1.
PE 3: Inferred from homology;
KW Cell wall biogenesis/degradation; Glycoprotein; Glycosyltransferase;
KW Golgi apparatus; Membrane; Reference proteome; Signal-anchor; Transferase;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..518
FT /note="Probable glycosyltransferase At5g03795"
FT /id="PRO_0000392294"
FT TOPO_DOM 1..25
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 26..46
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 47..518
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT CARBOHYD 104
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 113
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 120
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 282
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 320
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 518 AA; 58572 MW; D751FEC90A375D23 CRC64;
MGDEDVDGKC KNMSACSSTT SYSTKLFLFM VPLVVISGFV FVNIGPKDST SLLTSLSTTT
SHLPPPFLST APAPAPSPLL PEILPSLPAS SLSTKVESIQ GDYNRTIQLN MINVTATSNN
VSSTASLEPK KRRVLSNLEK IEFKLQKARA SIKAASMDDP VDDPDYVPLG PMYWNAKVFH
RSYLEMEKQF KIYVYKEGEP PLFHDGPCKS IYSMEGSFIY EIETDTRFRT NNPDKAHVFY
LPFSVVKMVR YVYERNSRDF SPIRNTVKDY INLVGDKYPY WNRSIGADHF ILSCHDWGPE
ASFSHPHLGH NSIRALCNAN TSERFKPRKD VSIPEINLRT GSLTGLVGGP SPSSRPILAF
FAGGVHGPVR PVLLQHWENK DNDIRVHKYL PRGTSYSDMM RNSKFCICPS GYEVASPRIV
EALYSGCVPV LINSGYVPPF SDVLNWRSFS VIVSVEDIPN LKTILTSISP RQYLRMYRRV
LKVRRHFEVN SPAKRFDVFH MILHSIWVRR LNVKIREV
