GLYT4_ARATH
ID GLYT4_ARATH Reviewed; 480 AA.
AC Q9LFP3; Q9LFP4;
DT 23-MAR-2010, integrated into UniProtKB/Swiss-Prot.
DT 23-MAR-2010, sequence version 2.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Probable glycosyltransferase At5g11130;
DE EC=2.4.-.-;
GN OrderedLocusNames=At5g11130/At5g11120; ORFNames=F2I11.10, F2I11.20, T5K6.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP IDENTIFICATION.
RX PubMed=18460606; DOI=10.1105/tpc.107.050906;
RA Jensen J.K., Sorensen S.O., Harholt J., Geshi N., Sakuragi Y., Moller I.,
RA Zandleven J., Bernal A.J., Jensen N.B., Sorensen C., Pauly M., Beldman G.,
RA Willats W.G., Scheller H.V.;
RT "Identification of a xylogalacturonan xylosyltransferase involved in pectin
RT biosynthesis in Arabidopsis.";
RL Plant Cell 20:1289-1302(2008).
CC -!- FUNCTION: May be involved in cell wall biosynthesis.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000250}; Single-
CC pass type II membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 47 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB96647.1; Type=Erroneous gene model prediction; Note=Was originally thought to correspond to two different genes At5g11120 and At5g11130.; Evidence={ECO:0000305};
CC Sequence=CAB96648.1; Type=Erroneous gene model prediction; Note=Was originally thought to correspond to two different genes At5g11120 and At5g11130.; Evidence={ECO:0000305};
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DR EMBL; AL360314; CAB96647.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL360314; CAB96648.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91637.1; -; Genomic_DNA.
DR RefSeq; NP_001331253.1; NM_001343157.1.
DR RefSeq; NP_196674.2; NM_121151.3.
DR AlphaFoldDB; Q9LFP3; -.
DR STRING; 3702.AT5G11130.1; -.
DR CAZy; GT47; Glycosyltransferase Family 47.
DR PaxDb; Q9LFP3; -.
DR PRIDE; Q9LFP3; -.
DR EnsemblPlants; AT5G11130.1; AT5G11130.1; AT5G11130.
DR GeneID; 830981; -.
DR Gramene; AT5G11130.1; AT5G11130.1; AT5G11130.
DR KEGG; ath:AT5G11130; -.
DR Araport; AT5G11130; -.
DR TAIR; locus:2147927; AT5G11130.
DR eggNOG; KOG1021; Eukaryota.
DR HOGENOM; CLU_025166_1_4_1; -.
DR InParanoid; Q9LFP3; -.
DR OrthoDB; 789556at2759; -.
DR PhylomeDB; Q9LFP3; -.
DR BioCyc; ARA:AT5G11130-MON; -.
DR PRO; PR:Q9LFP3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LFP3; baseline and differential.
DR Genevisible; Q9LFP3; AT.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0006486; P:protein glycosylation; IEA:InterPro.
DR InterPro; IPR004263; Exostosin.
DR InterPro; IPR040911; Exostosin_GT47.
DR PANTHER; PTHR11062; PTHR11062; 1.
DR Pfam; PF03016; Exostosin; 1.
PE 3: Inferred from homology;
KW Cell wall biogenesis/degradation; Glycoprotein; Glycosyltransferase;
KW Golgi apparatus; Membrane; Reference proteome; Signal-anchor; Transferase;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..480
FT /note="Probable glycosyltransferase At5g11130"
FT /id="PRO_0000392295"
FT TOPO_DOM 1..4
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 5..25
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 26..480
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT CARBOHYD 68
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 74
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 119
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 128
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 243
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 281
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 356
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 480 AA; 55363 MW; F36A2AEF32C55766 CRC64;
MADLTCTTPF LLYPSLVIIL FFYSINHHNQ IFSSVVDDDP SCRLSSSPQA VFSSFRIFPF
RSSSSCLNIT SNNNSTSEVV VVEEVDEAVE RIEEGLAMAR AAIRKAGEKN LRRDRDRTNN
SDVGVVSNGS VYLNAFTFHQ SHKEMEKRFK IWTYREGEAP LFHKGPLNNI YAIEGQFMDE
IENGNSRFKA ASPEEATVFY IPVGIVNIIR FVYRPYTSYA RDRLQNIVKD YISLISNRYP
YWNRSRGADH FFLSCHDWAP DVSAVDPELY KHFIRALCNA NSSEGFTPMR DVSLPEINIP
HSQLGFVHTG EPPQNRKLLA FFAGGSHGDV RKILFQHWKE KDKDVLVYEN LPKTMNYTKM
MDKAKFCLCP SGWEVASPRI VESLYSGCVP VIIADYYVLP FSDVLNWKTF SVHIPISKMP
DIKKILEAIT EEEYLNMQRR VLEVRKHFVI NRPSKPYDML HMIMHSIWLR RLNVRIPLSQ
