GMEB1_MOUSE
ID GMEB1_MOUSE Reviewed; 562 AA.
AC Q9JL60; Q80Y88;
DT 26-JUL-2002, integrated into UniProtKB/Swiss-Prot.
DT 27-JUL-2011, sequence version 2.
DT 03-AUG-2022, entry version 146.
DE RecName: Full=Glucocorticoid modulatory element-binding protein 1;
DE Short=GMEB-1;
GN Name=Gmeb1;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Embryo;
RX PubMed=10692587; DOI=10.1016/s0014-5793(00)01209-6;
RA Jimenez-Lara A.M., Heine M.J.S., Gronemeyer H.;
RT "Cloning of a mouse glucocorticoid modulatory element binding protein, a
RT new member of the KDWK family.";
RL FEBS Lett. 468:203-210(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J;
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=FVB/N; TISSUE=Colon;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Spleen;
RX PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL Cell 143:1174-1189(2010).
CC -!- FUNCTION: Trans-acting factor that binds to glucocorticoid modulatory
CC elements (GME) present in the TAT (tyrosine aminotransferase) promoter
CC and increases sensitivity to low concentrations of glucocorticoids.
CC Binds also to the transferrin receptor promoter (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homodimer, and heterodimer of GMEB1 and GMEB2. Interacts with
CC TRIM63 (By similarity). Interacts with the glucocorticoid receptor
CC (NR3C1) and NCOA2/TIF2. May interact with HSP27 and CREB-binding
CC protein (CBP). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm. Note=May be also cytoplasmic.
CC -!- TISSUE SPECIFICITY: Ubiquitous. Low levels were detected in heart,
CC brain, spleen, lung, liver, skeletal muscle, kidney and testis.
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DR EMBL; AF210433; AAF72874.1; -; mRNA.
DR EMBL; BX537301; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH466552; EDL30116.1; -; Genomic_DNA.
DR EMBL; BC046983; AAH46983.1; -; mRNA.
DR CCDS; CCDS18720.1; -.
DR RefSeq; NP_001116464.1; NM_001122992.1.
DR RefSeq; NP_064669.2; NM_020273.2.
DR RefSeq; XP_006539141.1; XM_006539078.3.
DR RefSeq; XP_006539142.1; XM_006539079.3.
DR RefSeq; XP_006539143.1; XM_006539080.3.
DR RefSeq; XP_017175821.1; XM_017320332.1.
DR AlphaFoldDB; Q9JL60; -.
DR SMR; Q9JL60; -.
DR BioGRID; 208184; 7.
DR IntAct; Q9JL60; 4.
DR STRING; 10090.ENSMUSP00000131331; -.
DR PhosphoSitePlus; Q9JL60; -.
DR EPD; Q9JL60; -.
DR MaxQB; Q9JL60; -.
DR PaxDb; Q9JL60; -.
DR PeptideAtlas; Q9JL60; -.
DR PRIDE; Q9JL60; -.
DR ProteomicsDB; 263379; -.
DR Antibodypedia; 30978; 170 antibodies from 25 providers.
DR DNASU; 56809; -.
DR Ensembl; ENSMUST00000030733; ENSMUSP00000030733; ENSMUSG00000028901.
DR Ensembl; ENSMUST00000105964; ENSMUSP00000101584; ENSMUSG00000028901.
DR Ensembl; ENSMUST00000105965; ENSMUSP00000101585; ENSMUSG00000028901.
DR Ensembl; ENSMUST00000168553; ENSMUSP00000131331; ENSMUSG00000028901.
DR GeneID; 56809; -.
DR KEGG; mmu:56809; -.
DR UCSC; uc008vat.2; mouse.
DR CTD; 10691; -.
DR MGI; MGI:2135604; Gmeb1.
DR VEuPathDB; HostDB:ENSMUSG00000028901; -.
DR eggNOG; KOG4333; Eukaryota.
DR GeneTree; ENSGT00410000025596; -.
DR HOGENOM; CLU_030344_1_0_1; -.
DR InParanoid; Q9JL60; -.
DR OMA; MVNPVEL; -.
DR OrthoDB; 692814at2759; -.
DR PhylomeDB; Q9JL60; -.
DR TreeFam; TF317090; -.
DR BioGRID-ORCS; 56809; 3 hits in 74 CRISPR screens.
DR ChiTaRS; Gmeb1; mouse.
DR PRO; PR:Q9JL60; -.
DR Proteomes; UP000000589; Chromosome 4.
DR RNAct; Q9JL60; protein.
DR Bgee; ENSMUSG00000028901; Expressed in animal zygote and 238 other tissues.
DR Genevisible; Q9JL60; MM.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0005634; C:nucleus; IDA:MGI.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IDA:NTNU_SB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:MGI.
DR GO; GO:0051008; F:Hsp27 protein binding; IEA:Ensembl.
DR GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IDA:NTNU_SB.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.10.390.10; -; 1.
DR InterPro; IPR024830; GMEB1/2.
DR InterPro; IPR010919; SAND-like_dom_sf.
DR InterPro; IPR000770; SAND_dom.
DR PANTHER; PTHR10417; PTHR10417; 1.
DR Pfam; PF01342; SAND; 1.
DR SMART; SM00258; SAND; 1.
DR SUPFAM; SSF63763; SSF63763; 1.
DR PROSITE; PS50864; SAND; 1.
PE 1: Evidence at protein level;
KW Acetylation; Coiled coil; Cytoplasm; DNA-binding; Metal-binding; Nucleus;
KW Reference proteome; Transcription; Transcription regulation; Zinc.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q9Y692"
FT CHAIN 2..562
FT /note="Glucocorticoid modulatory element-binding protein 1"
FT /id="PRO_0000074090"
FT DOMAIN 72..156
FT /note="SAND"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00185"
FT REGION 360..384
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 311..355
FT /evidence="ECO:0000255"
FT BINDING 103
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 129
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 133
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 136
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 147
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 160
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 164
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 168
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:Q9Y692"
FT CONFLICT 263
FT /note="V -> I (in Ref. 1; AAF72874)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 562 AA; 61058 MW; 733C8A0D50DD477E CRC64;
MANAEVSVPV GDVVVVPTEG NEGENPEDTK TQVILQLQPV QQGIYEAGSE NSAAVVAVET
HSIHKIEEGI DASSIEGNED MEIAYPITCG ESKAVLLWKK FVCPGINVKC VKFNDQLISP
KHFVHLAGKS TLKDWKRAIR LGGIMLRKMM DSGQIDFYQH DKVCSNTCRS TKFDLLISSA
RAPVPGQQTS VVQTPTSADG NITQIAISEE SMEEAGLEWN SALTAAVTMA TEEGIKKESE
EISEDTLMFW KGIADVGLME EVVCNIQKEM EELLRGVQQR LIQAPFQVTD AAVLNNVANT
FGLMDAVKRV LDNRRKQVEQ GEEQFLYTLA DLERQLEEQK KQAQDPRLKS QTVQNVVLMP
VSTPKPPKRP RLQRPASTTV LSPSPVQQPQ FTVISPITIT PVGQSFSMGN IPVATLSQGS
SPVTVHTLPS GPQLFRYATV VSSAKSNSPD TVTIHPSSSL ALLSSTSMQD GSSLGNMATM
VSPMELVAME SGLTSAIQAV ESTSEDGQTI IEIDPAPDSE ADDTEGKAVI LETGLRTEEK
VVAEMEEHQH QVHNVEIVVL ED