GMEB1_RAT
ID GMEB1_RAT Reviewed; 562 AA.
AC Q9QUZ8; B0BN09;
DT 26-JUL-2002, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 3.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Glucocorticoid modulatory element-binding protein 1;
DE Short=GMEB-1;
GN Name=Gmeb1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway;
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP PROTEIN SEQUENCE OF 123-129; 183-195 AND 317-334.
RX PubMed=7665613; DOI=10.1074/jbc.270.37.21893;
RA Oshima H., Szapary D., Simons S.S. Jr.;
RT "The factor binding to the glucocorticoid modulatory element of the
RT tyrosine aminotransferase gene is a novel and ubiquitous heteromeric
RT complex.";
RL J. Biol. Chem. 270:21893-21901(1995).
CC -!- FUNCTION: Trans-acting factor that binds to glucocorticoid modulatory
CC elements (GME) present in the TAT (tyrosine aminotransferase) promoter
CC and increases sensitivity to low concentrations of glucocorticoids.
CC Binds also to the transferrin receptor promoter (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homodimer, and heterodimer of GMEB1 and GMEB2. Interacts with
CC the glucocorticoid receptor (NR3C1) and NCOA2/TIF2. May interact with
CC HSP27 and CREB-binding protein (CBP). Interacts with TRIM63 (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm. Note=May be also cytoplasmic.
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DR EMBL; CH473968; EDL80619.1; -; Genomic_DNA.
DR EMBL; BC158640; AAI58641.1; -; mRNA.
DR RefSeq; NP_001102738.1; NM_001109268.2.
DR RefSeq; XP_008762387.1; XM_008764165.1.
DR RefSeq; XP_008762389.1; XM_008764167.2.
DR RefSeq; XP_008762390.1; XM_008764168.1.
DR AlphaFoldDB; Q9QUZ8; -.
DR SMR; Q9QUZ8; -.
DR STRING; 10116.ENSRNOP00000014506; -.
DR PhosphoSitePlus; Q9QUZ8; -.
DR PaxDb; Q9QUZ8; -.
DR PRIDE; Q9QUZ8; -.
DR Ensembl; ENSRNOT00000014506; ENSRNOP00000014506; ENSRNOG00000010910.
DR GeneID; 500558; -.
DR KEGG; rno:500558; -.
DR UCSC; RGD:1563208; rat.
DR CTD; 10691; -.
DR RGD; 1563208; Gmeb1.
DR eggNOG; KOG4333; Eukaryota.
DR GeneTree; ENSGT00410000025596; -.
DR HOGENOM; CLU_030344_1_0_1; -.
DR InParanoid; Q9QUZ8; -.
DR OMA; MVNPVEL; -.
DR OrthoDB; 692814at2759; -.
DR PhylomeDB; Q9QUZ8; -.
DR TreeFam; TF317090; -.
DR PRO; PR:Q9QUZ8; -.
DR Proteomes; UP000002494; Chromosome 5.
DR Proteomes; UP000234681; Chromosome 5.
DR Bgee; ENSRNOG00000010910; Expressed in thymus and 19 other tissues.
DR Genevisible; Q9QUZ8; RN.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0005634; C:nucleus; ISO:RGD.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; ISO:RGD.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISO:RGD.
DR GO; GO:0051008; F:Hsp27 protein binding; ISO:RGD.
DR GO; GO:0042802; F:identical protein binding; ISO:RGD.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; ISO:RGD.
DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:RGD.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:RGD.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.10.390.10; -; 1.
DR InterPro; IPR024830; GMEB1/2.
DR InterPro; IPR010919; SAND-like_dom_sf.
DR InterPro; IPR000770; SAND_dom.
DR PANTHER; PTHR10417; PTHR10417; 1.
DR Pfam; PF01342; SAND; 1.
DR SMART; SM00258; SAND; 1.
DR SUPFAM; SSF63763; SSF63763; 1.
DR PROSITE; PS50864; SAND; 1.
PE 1: Evidence at protein level;
KW Acetylation; Coiled coil; Cytoplasm; Direct protein sequencing;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q9Y692"
FT CHAIN 2..562
FT /note="Glucocorticoid modulatory element-binding protein 1"
FT /id="PRO_0000074091"
FT DOMAIN 72..156
FT /note="SAND"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00185"
FT REGION 360..384
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 311..357
FT /evidence="ECO:0000255"
FT BINDING 103
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 129
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 133
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 136
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 147
FT /ligand="DNA"
FT /ligand_id="ChEBI:CHEBI:16991"
FT /evidence="ECO:0000250"
FT BINDING 160
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 164
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 168
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:Q9Y692"
SQ SEQUENCE 562 AA; 61194 MW; B1A23491A5A76A38 CRC64;
MANAEVSVPV GDVVVVPTEG NEGENPEDTK TQVILQLQPV QQGIYEAGSE NSAAVVAVET
HTIHKIEEGI DASSIEANED MEIAYPITCG ESKAVLLWKK FVCPGINVKC VKFNDQLISP
KHFVHLAGKS TLKDWKRAIR LGGIMLRKMM DSGQIDFYQH DKVCSNTCRS TKFDLLISSA
RAPVPGQQTS VVQTPTSADG NITQIAISEE SMEEAGLEWN SALTAAVTMA TEEGIKKESE
EISEDTLMFW KGIADVGLME EVVCNIQKEI EELLRGVQQR LIHAPFQVTD AAVLNNVANT
FGLMDTVKRV LDNRRKQVEH GEEQFLYTLA DLERQLEEQK KQAQDPRLKS QTVQNVVLMP
VSTPKPPKRP RLQRPASTTV LSPSPVQQPQ FTVISPITIT PVGQSFSMGN IPVATLSQGT
SPVTVHTLPS GPQLFRYATV VSSAKSNSPD TVTIHPSSSL ALLSSTSMQD GSTLGNMATM
VSPVELVAME SGLTSAIQAV ESTSEDGQTI IEIDPAPDPE ADDPEGKAVI LETELRTEEK
VVANMEERQH QVHNVEIVVL ED