GP42_EBVG
ID GP42_EBVG Reviewed; 223 AA.
AC P0C6Z5; Q777E6;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 1.
DT 23-FEB-2022, entry version 56.
DE RecName: Full=Glycoprotein 42;
DE Short=gp42;
DE Contains:
DE RecName: Full=Soluble gp42;
GN ORFNames=BZLF2;
OS Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.
OX NCBI_TaxID=10376;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16306603; DOI=10.1128/jvi.79.24.15323-15330.2005;
RA Zeng M.-S., Li D.-J., Liu Q.-L., Song L.-B., Li M.-Z., Zhang R.-H.,
RA Yu X.-J., Wang H.-M., Ernberg I., Zeng Y.-X.;
RT "Genomic sequence analysis of Epstein-Barr virus strain GD1 from a
RT nasopharyngeal carcinoma patient.";
RL J. Virol. 79:15323-15330(2005).
CC -!- FUNCTION: Plays a role in virion attachment to host B-lymphocytes,
CC through binding to leukocyte antigen (HLA) class II and subsequently
CC participates in fusion of the virion with host membranes. May act as a
CC tropism switch that directs fusion with B-lymphocytes and inhibits
CC fusion with epithelial cells (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms a complex with gp25 and gp85 via its N-terminus; this
CC complex is used for invasion of B-lymphocytes. {ECO:0000250}.
CC -!- INTERACTION:
CC P0C6Z5; P0C734: BTRF1; NbExp=2; IntAct=EBI-2621381, EBI-2621388;
CC -!- SUBCELLULAR LOCATION: Virion membrane. Note=virions synthesized in B-
CC lymphocytes contain a lower amount of gp42 due to sequestration by
CC cellular HLA class II protein, whereas virions made from epithelial
CC cells has a higher amount of gp42. Membrane; Single-pass membrane
CC protein (By similarity). {ECO:0000250}.
CC -!- DOMAIN: The C-lectin type domain is essential for virion-induced
CC membrane fusion.
CC -!- SIMILARITY: Belongs to the epstein barr virus gp42 family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY961628; AAY41121.1; -; Genomic_DNA.
DR RefSeq; YP_401672.1; NC_007605.1.
DR PDB; 5T1D; X-ray; 3.10 A; C=33-223.
DR PDB; 6C5V; EM; 4.80 A; C=33-223.
DR PDBsum; 5T1D; -.
DR PDBsum; 6C5V; -.
DR SMR; P0C6Z5; -.
DR BioGRID; 971787; 1.
DR IntAct; P0C6Z5; 4.
DR MINT; P0C6Z5; -.
DR DNASU; 3783745; -.
DR GeneID; 3783745; -.
DR KEGG; vg:3783745; -.
DR Proteomes; UP000007641; Genome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR SUPFAM; SSF56436; SSF56436; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Disulfide bond; Host-virus interaction; Lectin; Membrane;
KW Transmembrane; Transmembrane helix; Virion.
FT CHAIN 1..223
FT /note="Glycoprotein 42"
FT /id="PRO_0000375941"
FT CHAIN 34..223
FT /note="Soluble gp42"
FT /id="PRO_0000433227"
FT TOPO_DOM 1..8
FT /note="Intravirion"
FT /evidence="ECO:0000255"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 30..223
FT /note="Virion surface"
FT /evidence="ECO:0000255"
FT DOMAIN 111..217
FT /note="C-type lectin"
FT SITE 33..34
FT /note="Potential cleavage"
FT /evidence="ECO:0000305"
FT DISULFID 99..138
FT /evidence="ECO:0000250"
FT DISULFID 102..115
FT /evidence="ECO:0000250"
FT DISULFID 128..214
FT /evidence="ECO:0000250"
FT DISULFID 132..216
FT /evidence="ECO:0000250"
FT DISULFID 192..208
FT /evidence="ECO:0000250"
FT HELIX 67..70
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 92..94
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 104..106
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 108..111
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 114..118
FT /evidence="ECO:0007829|PDB:5T1D"
FT HELIX 128..133
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 136..138
FT /evidence="ECO:0007829|PDB:5T1D"
FT TURN 146..148
FT /evidence="ECO:0007829|PDB:5T1D"
FT HELIX 149..154
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 169..172
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 193..195
FT /evidence="ECO:0007829|PDB:5T1D"
FT STRAND 214..218
FT /evidence="ECO:0007829|PDB:5T1D"
SQ SEQUENCE 223 AA; 25257 MW; F87541F6CEC26D74 CRC64;
MVSFKQVRVP LFTAIALVIV LLLAYFLPPR VRGGGRVAAA AITWVPKPNV EVWPVDPPPP
VNFNKTAEQE YGDKEVKLPH WTPTLHTFQV PQNYTKANCT YCNTREYTFS YKGCCFYFTK
KKHTWNGCFQ ACAELYPCTY FYGPTPDILP VVTRNLNAIE SLWVGVYRVG EGNWTSLDGG
TFKVYQIFGS HCTYVSKFST VPVSHHECSF LKPCLCVSQR SNS