GPCP2_CAEEL
ID GPCP2_CAEEL Reviewed; 796 AA.
AC Q10003; G5ECZ6;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 2 {ECO:0000250|UniProtKB:Q9NPB8};
DE EC=3.1.-.-;
GN Name=gpcp-2 {ECO:0000312|WormBase:T05H10.7a};
GN ORFNames=T05H10.7 {ECO:0000312|WormBase:T05H10.7a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a {ECO:0000312|WormBase:T05H10.7a};
CC IsoId=Q10003-1; Sequence=Displayed;
CC Name=b {ECO:0000312|WormBase:T05H10.7b};
CC IsoId=Q10003-2; Sequence=VSP_057654;
CC -!- SIMILARITY: Belongs to the glycerophosphoryl diester phosphodiesterase
CC family. {ECO:0000305}.
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DR EMBL; Z47812; CAA87796.1; -; Genomic_DNA.
DR EMBL; Z47811; CAA87796.1; JOINED; Genomic_DNA.
DR EMBL; BX284602; CAE48507.1; -; Genomic_DNA.
DR PIR; T23238; T23238.
DR RefSeq; NP_001022321.1; NM_001027150.1. [Q10003-1]
DR RefSeq; NP_001022322.1; NM_001027151.2.
DR AlphaFoldDB; Q10003; -.
DR SMR; Q10003; -.
DR BioGRID; 39627; 1.
DR STRING; 6239.T05H10.7a; -.
DR EPD; Q10003; -.
DR PaxDb; Q10003; -.
DR PeptideAtlas; Q10003; -.
DR EnsemblMetazoa; T05H10.7a.1; T05H10.7a.1; WBGene00011511. [Q10003-1]
DR EnsemblMetazoa; T05H10.7b.1; T05H10.7b.1; WBGene00011511. [Q10003-2]
DR GeneID; 174296; -.
DR KEGG; cel:CELE_T05H10.7; -.
DR UCSC; T05H10.7b.1; c. elegans. [Q10003-1]
DR CTD; 174296; -.
DR WormBase; T05H10.7a; CE03637; WBGene00011511; gpcp-2. [Q10003-1]
DR WormBase; T05H10.7b; CE01644; WBGene00011511; gpcp-2. [Q10003-2]
DR eggNOG; KOG2421; Eukaryota.
DR GeneTree; ENSGT00440000033970; -.
DR InParanoid; Q10003; -.
DR OMA; CFNPDIC; -.
DR OrthoDB; 687958at2759; -.
DR PhylomeDB; Q10003; -.
DR PRO; PR:Q10003; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00011511; Expressed in pharyngeal muscle cell (C elegans) and 4 other tissues.
DR GO; GO:0047389; F:glycerophosphocholine phosphodiesterase activity; IBA:GO_Central.
DR GO; GO:2001070; F:starch binding; IEA:InterPro.
DR GO; GO:0046475; P:glycerophospholipid catabolic process; IBA:GO_Central.
DR CDD; cd05814; CBM20_Prei4; 1.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.20.20.190; -; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR034839; CBM20_GPCPD1.
DR InterPro; IPR002044; CBM_fam20.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR Pfam; PF00686; CBM_20; 1.
DR Pfam; PF03009; GDPD; 1.
DR SMART; SM01065; CBM_2; 1.
DR SUPFAM; SSF49452; SSF49452; 1.
DR SUPFAM; SSF51695; SSF51695; 1.
DR PROSITE; PS51166; CBM20; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Hydrolase; Reference proteome.
FT CHAIN 1..796
FT /note="Putative glycerophosphocholine phosphodiesterase
FT GPCPD1 homolog 2"
FT /evidence="ECO:0000305"
FT /id="PRO_0000065449"
FT DOMAIN 78..195
FT /note="CBM20"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00594"
FT DOMAIN 401..711
FT /note="GP-PDE"
FT REGION 726..796
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 726..765
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 782..796
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 1..77
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_057654"
SQ SEQUENCE 796 AA; 90831 MW; 7BDF8E0A4D2AA9F1 CRC64;
MHFTRRAVSP RASFVFDRHV GTINSSLSRR PRISECVEEE EEDGGGFDLF EEMRQPIQEN
IPMIILEEEE DDNDNLVMSV ARPVRVHFAV DVENLHAHQS VYVVGSNDVL GTWEATRAMP
LVQDPDRFMR WKGSIVTDVH QLKFRYFIGY NLMSDQGERL IVDKWEAFLH PRSTLCLAES
RNDECRVDRV DLFGYYAGRK CVSDGWLQYP DENQILLRLH GNALKFYKTA KERKNCRVKM
TPLDVRFKAP PSGHISFSYG EDEEDEEEDQ NVPSNKCTHS ATHVAVLSDP RPKFYDQEDT
GVTFNNNKDY LVFRTHCLAA EFLAFYIEIF SEERKRIGAC YALPSSLQDA SGIIHLPFIN
SSGRPIGQVS IEYLCVRALT RLDGPQFMDQ TYCRHWKKRN ALEVGHRGAG NSYTKFAMAR
ENTIHSLNTA AKNGADYVEF DVQLTKDRIA VIYHDFHVLV SVARRDGLAM PPPMTREQLD
SSNLDYHELP VKDLKLSQLK LLMLDHLSFP QKKENVKKLV EAGEEEEDFK PFPTLLEALT
KVDPDVGFNV EVKYPMMQNN GEHECDHYFE RNLFVDVILA DVMKHAGNRR IMFSSFDPDI
CSMVATKQNK YPVLFLCVGE TQRYTPFQDQ RTSTSMTAVN FAAGADLLGV NFNSEDLLKD
PMPVKKANEF GMVTFVWGED LDKKENINYF KKELGVDGVI YDRIGEEERR RNVFIVEREQ
KRALLSCSGA STPQRAASPS PVSSENNNTS PPHSAKLTRN AQSDSALLEE NEDDVEHLSD
KLNITGFQSA PMVSTK