GPH_PSEPU
ID GPH_PSEPU Reviewed; 251 AA.
AC P42509;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Probable phosphoglycolate phosphatase;
DE Short=PGP;
DE Short=PGPase;
DE EC=3.1.3.18;
DE Flags: Fragment;
GN Name=gph;
OS Pseudomonas putida (Arthrobacter siderocapsulatus).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=303;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 23287 / C1S;
RX PubMed=2404959; DOI=10.1128/jb.172.2.867-883.1990;
RA Essar D.W., Eberly L., Crawford I.P.;
RT "Evolutionary differences in chromosomal locations of four early genes of
RT the tryptophan pathway in fluorescent pseudomonads: DNA sequences and
RT characterization of Pseudomonas putida trpE and trpGDC.";
RL J. Bacteriol. 172:867-883(1990).
CC -!- FUNCTION: Specifically catalyzes the dephosphorylation of 2-
CC phosphoglycolate. Is involved in the dissimilation of the intracellular
CC 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate
CC ends, a major class of DNA lesions induced by oxidative stress (By
CC similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-phosphoglycolate + H2O = glycolate + phosphate;
CC Xref=Rhea:RHEA:14369, ChEBI:CHEBI:15377, ChEBI:CHEBI:29805,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:58033; EC=3.1.3.18;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC -!- PATHWAY: Organic acid metabolism; glycolate biosynthesis; glycolate
CC from 2-phosphoglycolate: step 1/1.
CC -!- SIMILARITY: Belongs to the HAD-like hydrolase superfamily.
CC CbbY/CbbZ/Gph/YieH family. {ECO:0000305}.
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DR EMBL; M33799; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; F35115; F35115.
DR AlphaFoldDB; P42509; -.
DR SMR; P42509; -.
DR UniPathway; UPA00865; UER00834.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008967; F:phosphoglycolate phosphatase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0046295; P:glycolate biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 1.10.150.240; -; 1.
DR Gene3D; 3.40.50.1000; -; 1.
DR HAMAP; MF_00495; GPH_hydrolase_bact; 1.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR006439; HAD-SF_hydro_IA.
DR InterPro; IPR041492; HAD_2.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR023198; PGP-like_dom2.
DR InterPro; IPR006346; PGPase/MupP.
DR InterPro; IPR037512; PGPase_prok.
DR Pfam; PF13419; HAD_2; 1.
DR PRINTS; PR00413; HADHALOGNASE.
DR SUPFAM; SSF56784; SSF56784; 1.
DR TIGRFAMs; TIGR01549; HAD-SF-IA-v1; 1.
DR TIGRFAMs; TIGR01509; HAD-SF-IA-v3; 1.
DR TIGRFAMs; TIGR01449; PGP_bact; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Hydrolase; Magnesium; Metal-binding.
FT CHAIN <1..251
FT /note="Probable phosphoglycolate phosphatase"
FT /id="PRO_0000108035"
FT BINDING 161
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT NON_TER 1
SQ SEQUENCE 251 AA; 27465 MW; 41D77642C946F23E CRC64;
GTLIDSVPDL AAAVDRMLLE LGRPPADLEA VRHWVGNGAQ VLVRRALAGG IEHDAVDDVL
AEQGLALFME AYAQSHELTV VYPGVKDTLR WLQKQGVEMA LITNKPERFV APLLDQMKIG
RYFRWMIGGD TLPQKKPDPA ALLFVMQMAG VTPQQSLFVG DSRSDVLAAK AAGVQCVGLT
YGYNHGRPIH DETPSLVIDD LRALLPGCED PATGITLADL QASQDRESTV AVTGKFWMKV
IKALARWRWR A