GPN3_XENTR
ID GPN3_XENTR Reviewed; 285 AA.
AC Q28I42;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=GPN-loop GTPase 3 {ECO:0000250|UniProtKB:Q9UHW5};
DE AltName: Full=ATP-binding domain 1 family member C {ECO:0000250|UniProtKB:Q9UHW5};
GN Name=gpn3 {ECO:0000250|UniProtKB:Q9UHW5};
GN Synonyms=atpbd1c {ECO:0000250|UniProtKB:Q9UHW5}; ORFNames=TEgg091j20.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Egg;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=N6; TISSUE=Oviduct;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Small GTPase required for proper localization of RNA
CC polymerase II (RNAPII). May act at an RNAP assembly step prior to
CC nuclear import. {ECO:0000250|UniProtKB:Q9UHW5}.
CC -!- SUBUNIT: Heterodimer with gpn1. Binds to RNA polymerase II (RNAPII).
CC {ECO:0000250|UniProtKB:Q9UHW5}.
CC -!- SIMILARITY: Belongs to the GPN-loop GTPase family. {ECO:0000305}.
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DR EMBL; CR760599; CAJ81316.1; -; mRNA.
DR EMBL; BC121552; AAI21553.1; -; mRNA.
DR RefSeq; NP_001017191.1; NM_001017191.2.
DR AlphaFoldDB; Q28I42; -.
DR SMR; Q28I42; -.
DR PaxDb; Q28I42; -.
DR DNASU; 549945; -.
DR GeneID; 549945; -.
DR KEGG; xtr:549945; -.
DR CTD; 51184; -.
DR Xenbase; XB-GENE-973716; gpn3.
DR eggNOG; KOG1534; Eukaryota.
DR HOGENOM; CLU_037460_0_0_1; -.
DR InParanoid; Q28I42; -.
DR OMA; KSTYCAI; -.
DR OrthoDB; 964931at2759; -.
DR PhylomeDB; Q28I42; -.
DR TreeFam; TF105810; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000020939; Expressed in egg cell and 13 other tissues.
DR ExpressionAtlas; Q28I42; differential.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR004130; Gpn.
DR InterPro; IPR030228; Gpn3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21231; PTHR21231; 1.
DR PANTHER; PTHR21231:SF7; PTHR21231:SF7; 1.
DR Pfam; PF03029; ATP_bind_1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 2: Evidence at transcript level;
KW GTP-binding; Hydrolase; Nucleotide-binding; Reference proteome.
FT CHAIN 1..285
FT /note="GPN-loop GTPase 3"
FT /id="PRO_0000304795"
FT REGION 261..285
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 72..74
FT /note="Gly-Pro-Asn (GPN)-loop; involved in dimer interface"
FT /evidence="ECO:0000250|UniProtKB:Q9UYR9"
FT BINDING 13..18
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250|UniProtKB:Q9UYR9"
FT BINDING 174..177
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250|UniProtKB:Q9UYR9"
FT SITE 74
FT /note="Stabilizes the phosphate intermediate; shared with
FT dimeric partner"
FT /evidence="ECO:0000250|UniProtKB:Q9UYR9"
SQ SEQUENCE 285 AA; 32921 MW; E8D455AF51543E7C CRC64;
MPRYAQLVMG PAGSGKSTYC STMVQHCGSL NRSVQVVNLD PAAEHFDYPV LADIRELIEV
DDVMEDRSLR FGPNGGLVYC MEYFANNFDW LESCLGHTED DYILFDCPGQ IELYTHLPVM
KYLVEQLQQW EFRVCGVFLV DSQFMVESFK FLSGVLAALS AMVSLEIPQC NIMTKMDLLG
KKAKKEIEKF LDPDMYSMIE DTSNRFKSNK FKKLTEALCG LIDDYSMVRF LPFDRSDEEC
MNIVLQHIDF AIQYGEDLEF KEPKENEEDK SENFDEFFQD RADEP