GRC3_DEBHA
ID GRC3_DEBHA Reviewed; 680 AA.
AC Q6BQV7;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Polynucleotide 5'-hydroxyl-kinase GRC3;
DE EC=2.7.1.-;
GN Name=GRC3; OrderedLocusNames=DEHA2E01892g;
OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990
OS / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX NCBI_TaxID=284592;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Polynucleotide 5'-kinase involved in rRNA processing.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Clp1 family. NOL9/GRC3 subfamily.
CC {ECO:0000305}.
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DR EMBL; CR382137; CAG87624.2; -; Genomic_DNA.
DR RefSeq; XP_459413.2; XM_459413.1.
DR AlphaFoldDB; Q6BQV7; -.
DR SMR; Q6BQV7; -.
DR STRING; 4959.XP_459413.2; -.
DR EnsemblFungi; CAG87624; CAG87624; DEHA2E01892g.
DR GeneID; 2902894; -.
DR KEGG; dha:DEHA2E01892g; -.
DR VEuPathDB; FungiDB:DEHA2E01892g; -.
DR eggNOG; KOG2750; Eukaryota.
DR HOGENOM; CLU_010345_1_1_1; -.
DR InParanoid; Q6BQV7; -.
DR OMA; PNIAVEC; -.
DR OrthoDB; 1217334at2759; -.
DR Proteomes; UP000000599; Chromosome E.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0051731; F:polynucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR GO; GO:0006364; P:rRNA processing; ISS:UniProtKB.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR045116; Clp1/Grc3.
DR InterPro; IPR032319; CLP1_P.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR12755; PTHR12755; 1.
DR Pfam; PF16575; CLP1_P; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Kinase; Nucleotide-binding; Nucleus; Reference proteome;
KW rRNA processing; Transferase.
FT CHAIN 1..680
FT /note="Polynucleotide 5'-hydroxyl-kinase GRC3"
FT /id="PRO_0000087592"
FT REGION 38..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 268..275
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 680 AA; 77674 MW; DCEFBD7E960628D0 CRC64;
MSAYAALQKM SGASSILYGI NGESDNDESG TIGYLRNSSD EEVEAEEAEV PTTSTMAPTP
NIIRTPSIVP KINSFICESN FIPNDDNFIV FHDHIIIGLK ANEYILINGQ SKMTIQRGAI
LINTGHYMFA HPNNCIPIIA SQSQSLPIIS STQVVDRSGI KDSKTDENMH LFSSNYKSII
KLENLYTGLE KIGTYHPPFK RLFYSHAVIE DEDLTEYERL FKTYSFEIIL RDRGCIGISI
EKLWLNQIQL LISDIHEDLI PKTIMIIGNK NSGKSTLSKT LLNSLILANQ NTVSYLDLDP
GQSEFSMPYC LSLTNHSKPI IGMNVPKVSG DEDSVSHYYG FTTPQSQPSQ YVSIIKALFR
EYDQVYRPRG HHLIINTPGW IKGYGKELLN ELTAFINPNQ LILLSNNTDN DNMDNSDNLS
GLTFQNSRCF QGIYQTSKYS PFQLRMYNKL SYFHQVDTLK FDFNSHILLR SPLKLSYETV
NSSKDFKGIN MVSVLNYDTG LNFELNDLLS MIDTSIMGLY LIDHEYYSSL KASLKKSEDC
DYLPQYLNST DYVNLINYSS SNNIFMGLCM VHSINTKDEF FNIYLPGHNQ HRLTEMITKR
DYKMLLVKGD GDIPSPDLLM FDMLLKQQED LKRLNKKRKK NPNVDDKDVL KIPYVTFENK
NKIGGIWKTR RNVMRRSHQR