GRC3_EMENI
ID GRC3_EMENI Reviewed; 816 AA.
AC Q5B4D1; C8V7U0;
DT 29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Polynucleotide 5'-hydroxyl-kinase grc3;
DE EC=2.7.1.-;
GN Name=grc3; ORFNames=AN4599;
OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
OS M139) (Aspergillus nidulans).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Nidulantes.
OX NCBI_TaxID=227321;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=16372000; DOI=10.1038/nature04341;
RA Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S.,
RA Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J., Kapitonov V.,
RA Jurka J., Scazzocchio C., Farman M.L., Butler J., Purcell S., Harris S.,
RA Braus G.H., Draht O., Busch S., D'Enfert C., Bouchier C., Goldman G.H.,
RA Bell-Pedersen D., Griffiths-Jones S., Doonan J.H., Yu J., Vienken K.,
RA Pain A., Freitag M., Selker E.U., Archer D.B., Penalva M.A., Oakley B.R.,
RA Momany M., Tanaka T., Kumagai T., Asai K., Machida M., Nierman W.C.,
RA Denning D.W., Caddick M.X., Hynes M., Paoletti M., Fischer R., Miller B.L.,
RA Dyer P.S., Sachs M.S., Osmani S.A., Birren B.W.;
RT "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT fumigatus and A. oryzae.";
RL Nature 438:1105-1115(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H.,
RA Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M.,
RA Estrada C.G., Geysens S., Goldman G., de Groot P.W., Hansen K.,
RA Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G.,
RA Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L.,
RA Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M.,
RA van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P.,
RA Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J.,
RA Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A.,
RA Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X.,
RA Robson G., Seiboth B., van Solingen P., Specht T., Sun J.,
RA Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H.,
RA van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y.,
RA Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J.,
RA Oliver S.G., Turner G.;
RT "The 2008 update of the Aspergillus nidulans genome annotation: a community
RT effort.";
RL Fungal Genet. Biol. 46:S2-13(2009).
CC -!- FUNCTION: Polynucleotide 5'-kinase involved in rRNA processing.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Clp1 family. NOL9/GRC3 subfamily.
CC {ECO:0000305}.
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DR EMBL; AACD01000079; EAA60401.1; -; Genomic_DNA.
DR EMBL; BN001303; CBF77175.1; -; Genomic_DNA.
DR RefSeq; XP_662203.1; XM_657111.1.
DR AlphaFoldDB; Q5B4D1; -.
DR SMR; Q5B4D1; -.
DR STRING; 162425.CADANIAP00005837; -.
DR EnsemblFungi; CBF77175; CBF77175; ANIA_04599.
DR EnsemblFungi; EAA60401; EAA60401; AN4599.2.
DR GeneID; 2872397; -.
DR KEGG; ani:AN4599.2; -.
DR VEuPathDB; FungiDB:AN4599; -.
DR eggNOG; KOG2750; Eukaryota.
DR HOGENOM; CLU_010345_1_2_1; -.
DR InParanoid; Q5B4D1; -.
DR OMA; PLYQRIW; -.
DR OrthoDB; 1217334at2759; -.
DR Proteomes; UP000000560; Chromosome III.
DR Proteomes; UP000005890; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0051731; F:polynucleotide 5'-hydroxyl-kinase activity; ISS:UniProtKB.
DR GO; GO:0000448; P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; ISS:UniProtKB.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR045116; Clp1/Grc3.
DR InterPro; IPR032319; CLP1_P.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR12755; PTHR12755; 1.
DR Pfam; PF16575; CLP1_P; 1.
PE 3: Inferred from homology;
KW ATP-binding; Kinase; Nucleotide-binding; Nucleus; Reference proteome;
KW rRNA processing; Transferase.
FT CHAIN 1..816
FT /note="Polynucleotide 5'-hydroxyl-kinase grc3"
FT /id="PRO_0000289955"
FT REGION 1..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 603..626
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 23..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..122
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 332..339
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 816 AA; 89980 MW; 99BE1D555A1EE825 CRC64;
MMKRKADRQT AAAAPVSAFA ARKARLQQTQ TQVQTVVASE KTTHTDVAAE PPSKRPRRSL
QESQAQSTSE EDTKRTSKRS AAKTEKVQRV DSGTITRTRE TRMKDSEIEV EDLEKERSSN
EESEGEDAVE ENAAGVVAVP AAEDGYESPA DNTMTVVFPL SKIRLNKNNI VYSDEDTLCV
RIQEKLSIVL IGQYDLWVKR GVVSVMGAKL HPSPRVYRVY APSTHSLPVI KCVTGVNGAA
EVEFKSCHSG ITRLRDLSPL YQRLWNSGNT PADKLSLKAV GQDARRTFSV LHTSADDPLK
RHLRPLHLEK QWSAAIKVLS QRAGRLQVLI CGPKASGKST FGRYLLNHLL SPAPQPELNY
TNTDGVAFLD LDPGQPEFLP MGQVYLAHLR SPVFGPPFTH PSLNNEREGT IIRAHHIGAT
SPKEDPDHYV LAAANLMEQY RTLLATYPQC PLIINYPGWI FGLGLEVATY LIQSLGLSDV
VYMSEKGPTE VVEPLSQAAS LARVSLTILP SQPTEFVSRS SAQLRSMQMQ SYFHMAQPAG
VSHPTWLENP VSKNRPFRVR YAGENRGVHG VMTLDSQIIP DLLCESLEGA LVGVVAIESP
NALPIPSSNA PPANEEEATS NADDDVDMEN ETEHNRNATI SHLTTLTIST KESLPYITSG
PGTSTPLHPS SSSMLGLALI RSINPDTQTL DLVTPIPSTR LIQSLERGHA LVLVRGVLDN
PNWAVAEEYY AARAEERRVR RGIRGRKEAG VGEQGDESVE QRLLGLLKER IRRAKDVPFM
TVVEDHGRRK QEEAAQRALW KLRKKAGIES EDEVGY