GRDB_PEPLI
ID GRDB_PEPLI Reviewed; 436 AA.
AC P52217;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=Glycine reductase complex component B subunit gamma;
DE EC=1.21.4.2;
DE AltName: Full=Selenoprotein PB gamma;
GN Name=grdB;
OS Peptoclostridium litorale (Clostridium litorale).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Peptoclostridium.
OX NCBI_TaxID=1557;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 49638 / DSM 5388 / W6;
RX PubMed=8529640; DOI=10.1111/j.1432-1033.1995.192_c.x;
RA Kreimer S., Andreesen J.R.;
RT "Glycine reductase of Clostridium litorale. Cloning, sequencing, and
RT molecular analysis of the grdAB operon that contains two in-frame TGA
RT codons for selenium incorporation.";
RL Eur. J. Biochem. 234:192-199(1995).
CC -!- FUNCTION: In the first step of glycine reductase, the substrate is
CC bound to component PB via a Schiff base intermediate. Then the PB-
CC activated substrate is nucleophilically attacked by the selenol anion
CC of component PA to transform it to a carboxymethylated selenoether and
CC the respective amine. By action of component PC, acetyl phosphate is
CC formed, leaving component PA in its oxidized state. Finally component
CC PA becomes reduced by the thioredoxin system to start a new catalytic
CC cycle of reductive deamination.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[thioredoxin]-disulfide + acetyl phosphate + H2O + NH4(+) =
CC [thioredoxin]-dithiol + glycine + H(+) + phosphate;
CC Xref=Rhea:RHEA:12232, Rhea:RHEA-COMP:10698, Rhea:RHEA-COMP:10700,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:22191,
CC ChEBI:CHEBI:28938, ChEBI:CHEBI:29950, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:50058, ChEBI:CHEBI:57305; EC=1.21.4.2;
CC -!- SUBUNIT: Heterohexamer of two alpha, two beta and two gamma subunits.
CC Component of the glycine reductase complex, together with components A
CC and C. PB is substrate specific.
CC -!- SIMILARITY: Belongs to the GrdB/GrdF/GrdH family. {ECO:0000305}.
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DR EMBL; U24268; AAC43574.2; -; Genomic_DNA.
DR PIR; S63988; S63988.
DR PRIDE; P52217; -.
DR GO; GO:0030700; C:glycine reductase complex; IEA:InterPro.
DR GO; GO:0030699; F:glycine reductase activity; IEA:UniProtKB-EC.
DR InterPro; IPR010186; Gly_red_sel_B.
DR InterPro; IPR010187; Various_sel_PB.
DR Pfam; PF07355; GRDB; 1.
DR TIGRFAMs; TIGR01917; gly_red_sel_B; 1.
DR TIGRFAMs; TIGR01918; various_sel_PB; 1.
PE 3: Inferred from homology;
KW Oxidoreductase; Selenocysteine.
FT CHAIN 1..436
FT /note="Glycine reductase complex component B subunit gamma"
FT /id="PRO_0000087598"
FT ACT_SITE 350
FT NON_STD 350
FT /note="Selenocysteine"
SQ SEQUENCE 436 AA; 46600 MW; 997AEDCCCD1F0E89 CRC64;
MGKLRVVHYI NQFFAGIGGE EKADIAPFVA EELPPISQNL DKLLGEDAEV VATVVCGDSF
FGENLETAQA TVLEMVKGAS PDLFIAGPAF NAGRYGVAAG AITKAVQDTL GIPAVTGMYI
ENPGADMYKK SVYVMSTADS AAGMRKSLPA LAKFALKYAK GEEIGSPAEE GYIERGIRVN
GFKEDRGAKR AVAMLVKKLK GEEFVTEYPM PVFDNVVPGR AIVNMSKAKI AIVTSGGIVP
KGNPDRIESS SASKYGKYDI DGVDDLTSEG WETAHGGHDP VYANEDADRV IPVDVLRDME
KEGVIGELHR YFYSTTGNGT AVLSSKQFAK EFTQELMAAG VDAVILTSTU GTCTRCGATM
VKEIERSGIP VVHICTVTPI ALTVGANRIV PAIAIPHPLG DPALSPAEEK ALRRKIVEKS
LKALETEIEE QTVFED