GREA_RICPR
ID GREA_RICPR Reviewed; 162 AA.
AC P27640;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 1.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105};
DE AltName: Full=Transcript cleavage factor GreA {ECO:0000255|HAMAP-Rule:MF_00105};
GN Name=greA {ECO:0000255|HAMAP-Rule:MF_00105}; OrderedLocusNames=RP861;
OS Rickettsia prowazekii (strain Madrid E).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
OX NCBI_TaxID=272947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Madrid E;
RX PubMed=1641348; DOI=10.1093/nar/20.14.3785;
RA Marks G.L., Wood D.O.;
RT "Nucleotide sequence of the Rickettsia prowazekii greA homolog.";
RL Nucleic Acids Res. 20:3785-3785(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Madrid E;
RX PubMed=9335295; DOI=10.1128/jb.179.20.6448-6452.1997;
RA Shaw E.I., Marks G.L., Winkler H.H., Wood D.O.;
RT "Transcriptional characterization of the Rickettsia prowazekii major
RT macromolecular synthesis operon.";
RL J. Bacteriol. 179:6448-6452(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Madrid E;
RX PubMed=9823893; DOI=10.1038/24094;
RA Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T.,
RA Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H.,
RA Kurland C.G.;
RT "The genome sequence of Rickettsia prowazekii and the origin of
RT mitochondria.";
RL Nature 396:133-140(1998).
CC -!- FUNCTION: Necessary for efficient RNA polymerase transcription
CC elongation past template-encoded arresting sites. The arresting sites
CC in DNA have the property of trapping a certain fraction of elongating
CC RNA polymerases that pass through, resulting in locked ternary
CC complexes. Cleavage of the nascent transcript by cleavage factors such
CC as GreA or GreB allows the resumption of elongation from the new
CC 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
CC {ECO:0000255|HAMAP-Rule:MF_00105}.
CC -!- SIMILARITY: Belongs to the GreA/GreB family. {ECO:0000255|HAMAP-
CC Rule:MF_00105}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; Z12122; CAA78107.1; -; Genomic_DNA.
DR EMBL; U02878; AAB81401.1; -; Unassigned_DNA.
DR EMBL; AJ235273; CAA15285.1; -; Genomic_DNA.
DR PIR; S26176; S26176.
DR RefSeq; NP_221209.1; NC_000963.1.
DR RefSeq; WP_004596757.1; NC_000963.1.
DR AlphaFoldDB; P27640; -.
DR SMR; P27640; -.
DR STRING; 272947.RP861; -.
DR EnsemblBacteria; CAA15285; CAA15285; CAA15285.
DR GeneID; 57569984; -.
DR KEGG; rpr:RP861; -.
DR PATRIC; fig|272947.5.peg.900; -.
DR eggNOG; COG0782; Bacteria.
DR HOGENOM; CLU_101379_2_0_5; -.
DR OMA; TWLTQEA; -.
DR Proteomes; UP000002480; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0070063; F:RNA polymerase binding; IEA:InterPro.
DR GO; GO:0032784; P:regulation of DNA-templated transcription, elongation; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.287.180; -; 1.
DR Gene3D; 3.10.50.30; -; 1.
DR HAMAP; MF_00105; GreA_GreB; 1.
DR InterPro; IPR036953; GreA/GreB_C_sf.
DR InterPro; IPR018151; TF_GreA/GreB_CS.
DR InterPro; IPR006359; Tscrpt_elong_fac_GreA.
DR InterPro; IPR028624; Tscrpt_elong_fac_GreA/B.
DR InterPro; IPR001437; Tscrpt_elong_fac_GreA/B_C.
DR InterPro; IPR023459; Tscrpt_elong_fac_GreA/B_fam.
DR InterPro; IPR022691; Tscrpt_elong_fac_GreA/B_N.
DR InterPro; IPR036805; Tscrpt_elong_fac_GreA/B_N_sf.
DR PANTHER; PTHR30437; PTHR30437; 1.
DR Pfam; PF01272; GreA_GreB; 1.
DR Pfam; PF03449; GreA_GreB_N; 1.
DR PIRSF; PIRSF006092; GreA_GreB; 1.
DR SUPFAM; SSF46557; SSF46557; 1.
DR TIGRFAMs; TIGR01462; greA; 1.
DR PROSITE; PS00829; GREAB_1; 1.
DR PROSITE; PS00830; GREAB_2; 1.
PE 3: Inferred from homology;
KW Coiled coil; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..162
FT /note="Transcription elongation factor GreA"
FT /id="PRO_0000176964"
FT COILED 45..74
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00105"
SQ SEQUENCE 162 AA; 18230 MW; F6774DA35140BD2B CRC64;
MNTKFPITAK GFKKLEHELK HLKHVERKKI SEDIAEAREH GDLSENAEYE AAREKQAFIE
GRIKELEDMT ARAEIIDICK LSGDNIKFGA TVTLIDDDTE EEVTYIIVGE YEADITKKRV
SIASPIAKAL IGKSVGDFVE VTTPKGLKSY EVVTVEYKEL DL