GRH1_CAEEL
ID GRH1_CAEEL Reviewed; 563 AA.
AC G5EDF0;
DT 02-DEC-2020, integrated into UniProtKB/Swiss-Prot.
DT 14-DEC-2011, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Grainyhead-like protein 1 homolog {ECO:0000312|WormBase:Y48G8AR.1a};
GN Name=grh-1 {ECO:0000312|WormBase:Y48G8AR.1a};
GN ORFNames=Y48G8AR.1 {ECO:0000312|WormBase:Y48G8AR.1a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|Proteomes:UP000001940};
RN [1] {ECO:0000312|EMBL:AAP78770.1}
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, DEVELOPMENTAL STAGE, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=12888489; DOI=10.1093/nar/gkg644;
RA Venkatesan K., McManus H.R., Mello C.C., Smith T.F., Hansen U.;
RT "Functional conservation between members of an ancient duplicated
RT transcription factor family, LSF/Grainyhead.";
RL Nucleic Acids Res. 31:4304-4316(2003).
RN [2] {ECO:0000312|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000312|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Probable transcription factor that binds a motif with the
CC core sequence 5'-C[ACT][TG]G-3'. {ECO:0000269|PubMed:12888489}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DEVELOPMENTAL STAGE: Expressed in embryos, larvae and adults.
CC {ECO:0000269|PubMed:12888489}.
CC -!- DISRUPTION PHENOTYPE: RNAi-mediated knockdown results in defective
CC cuticle development (PubMed:12888489). RNAi-mediated knockdown in L4
CC stage larvae has no effect, but upon reaching adulthood, over 95% of
CC the embryos produced by these animals arrest and fail to hatch
CC (PubMed:12888489). Development arrests at the three-fold stage, showing
CC abnormal constrictions or puckering in the external cuticle and
CC approximately 8% of embryos exhibit ruptures in their cuticles
CC resulting in the extrusion of cells (PubMed:12888489).
CC {ECO:0000269|PubMed:12888489}.
CC -!- SIMILARITY: Belongs to the grh/CP2 family. Grainyhead subfamily.
CC {ECO:0000305}.
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DR EMBL; AY323527; AAP78770.1; -; mRNA.
DR EMBL; BX284601; CCD72954.1; -; Genomic_DNA.
DR RefSeq; NP_490837.2; NM_058436.4.
DR AlphaFoldDB; G5EDF0; -.
DR SMR; G5EDF0; -.
DR STRING; 6239.Y48G8AR.1; -.
DR EPD; G5EDF0; -.
DR PaxDb; G5EDF0; -.
DR PeptideAtlas; G5EDF0; -.
DR EnsemblMetazoa; Y48G8AR.1a.1; Y48G8AR.1a.1; WBGene00001707.
DR GeneID; 190048; -.
DR CTD; 190048; -.
DR WormBase; Y48G8AR.1a; CE34614; WBGene00001707; grh-1.
DR eggNOG; KOG4091; Eukaryota.
DR HOGENOM; CLU_005625_3_1_1; -.
DR InParanoid; G5EDF0; -.
DR OMA; LMVVFRE; -.
DR PhylomeDB; G5EDF0; -.
DR Proteomes; UP000001940; Chromosome I.
DR ExpressionAtlas; G5EDF0; baseline and differential.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
DR GO; GO:0007568; P:aging; IMP:UniProtKB.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR007604; CP2.
DR Pfam; PF04516; CP2; 1.
DR PROSITE; PS51968; GRH_CP2_DB; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..563
FT /note="Grainyhead-like protein 1 homolog"
FT /id="PRO_0000451597"
FT DOMAIN 194..428
FT /note="Grh/CP2 DB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01313"
FT REGION 326..335
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250|UniProtKB:Q9NZI5"
FT REGION 372..375
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250|UniProtKB:Q9NZI5"
FT REGION 377..405
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 563 AA; 64052 MW; 5D4F29CEE04CE769 CRC64;
MSFQLDQSTS VIKTAPPGRL EFKNEPIDIA SSNIQDLAKM QTLDGYYQQT SLQLPQSQQY
HRMYENVYNN QQILYAQTQN FQYPSTLLTN GSLAQTEWRG QQMDTSAYSN TGYSRSSTSQ
QPQYTQQVTE NERIVYKPVD MPSPVDSGIG GDISILNPKE EFFTSADGGS MLERSSERTL
SHRDSPLVIP KLYNNLGFQY VLEAPISTSV RRDDDRMTYV NKGQFYTVSL EYTPDLNKCL
KSQTVKSQLM VVFREDKTYE EEIKTWQSWH ARQHVSKQRI LEIDSKNSSG MIGQIEEIGN
NAVQFYWNPS DPSGVRISIA VQCLSTDFST QKGVKGLPLH VQIDTYDGEN DKVPFHRGYC
QIKVFCDKGA ERKLRDEDKR AQKRKVQEYT AGALPGGRKK SDGEYHDQCE RSEFYHMREL
DKPAALFIAP EEFEPRYVDS TSLSFDMSEI EPIPTKRPRT SERIMLYVRK RDEQIYQPLH
VVPASLSGLA LAIANKFGAD PDKMSGVYKR CAKGITVKVD DEMLRLYCNE DTFIIDVEHA
TDGSTAATLI EVAPTNPNSY SNS