GRHL3_XENTR
ID GRHL3_XENTR Reviewed; 594 AA.
AC Q6GL65; Q28DS4;
DT 21-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Grainyhead-like protein 3 homolog;
DE AltName: Full=Transcription factor CP2-like 4;
GN Name=grhl3; Synonyms=tfcp2l4; ORFNames=TGas117i15.1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Gastrula;
RG Sanger Xenopus tropicalis EST/cDNA project;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor playing important roles in primary
CC neurulation and in the differentiation of stratified epithelia of both
CC ectodermal and endodermal origin. Binds directly to the consensus DNA
CC sequence 5'-AACCGGTT-3' acting as an activator and repressor on
CC distinct target genes. {ECO:0000250|UniProtKB:Q5FWH3,
CC ECO:0000250|UniProtKB:Q8TE85}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q6ISB3,
CC ECO:0000250|UniProtKB:Q8TE85}.
CC -!- MISCELLANEOUS: GRHL genes (GRHL1, GRHL2 and GRHL3) show a paradoxal
CC lack of redundancy despite their extensive sequence identity in the
CC DNA-binding and protein dimerization domains and the fact that the core
CC consensus DNA binding sites are identical. They have related but
CC remarkably different functions during embryogenesis because of their
CC differential spatiotemporal expression patterns during development.
CC {ECO:0000250|UniProtKB:Q5FWH3}.
CC -!- SIMILARITY: Belongs to the grh/CP2 family. Grainyhead subfamily.
CC {ECO:0000305}.
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DR EMBL; CR848623; CAJ83942.1; -; mRNA.
DR EMBL; BC074642; AAH74642.1; -; mRNA.
DR RefSeq; NP_001005642.1; NM_001005642.1.
DR AlphaFoldDB; Q6GL65; -.
DR SMR; Q6GL65; -.
DR STRING; 8364.ENSXETP00000060412; -.
DR PaxDb; Q6GL65; -.
DR DNASU; 448111; -.
DR GeneID; 448111; -.
DR KEGG; xtr:448111; -.
DR CTD; 57822; -.
DR Xenbase; XB-GENE-919797; grhl3.
DR eggNOG; KOG4091; Eukaryota.
DR HOGENOM; CLU_021156_1_1_1; -.
DR InParanoid; Q6GL65; -.
DR OrthoDB; 286319at2759; -.
DR PhylomeDB; Q6GL65; -.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000003899; Expressed in embryo and 6 other tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR007604; CP2.
DR Pfam; PF04516; CP2; 1.
DR PROSITE; PS51968; GRH_CP2_DB; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..594
FT /note="Grainyhead-like protein 3 homolog"
FT /id="PRO_0000228000"
FT DOMAIN 220..453
FT /note="Grh/CP2 DB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01313"
FT REGION 25..75
FT /note="Transcription activation"
FT REGION 28..91
FT /note="Transcription activation"
FT /evidence="ECO:0000250|UniProtKB:Q8TE85"
FT REGION 483..503
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 594 AA; 68264 MW; 67FA0F10EC8CC45C CRC64;
MSNELDYRPV MLLQNDINLK YSSPNDDEAW SKYLENPMTA ATKAMMRANG DDDGVAALSL
LYDYYRVPKE KRIITQGSTG RCDQVKRSCI EYDSDISTYD STQLMRFLND NNSSTHEYSE
THKKNSYLSL DCLINPSKLP LSSGKLDNNA HDDFMATSCD VYEKNPLTTL FDPIHVPPPQ
QRWQPDSTFK EDTPEPLIFN DILRSQAEST CSEDYIPGEA NRDFECTLES PKAIHIKSGE
SPMAYLNKGQ FYPVNLRTAE TRKCVHLTSN KVKSVVMVVF DNEKNPEEQL KRWKHWHSRQ
PTAKQRVIDV ADYKENCNTV ENIEEVAYNA LSFVWNINEE AKIFIGINCL STDFSSQKGV
KGVPLNLQID TYDFETGVKR LIHRAVCQIK IFCDKGAERK MRDEERKQFR RKGKSADQNN
KDIKASVLPG YRGSDFTYLR PVTDMETHPV LFIPNIHYSN LQRCGVVLQS AADNSDRLSL
KRSSQSFPES FEAPPSKQQT NEDPQRVLLY VRRETEEVFD ALMLKTPDLK GLRNAISEKY
ELPEERICRV YKKCKRGILV NMDNNIIQHY SNHVAFLLDL TDVDGKIQVT LKEL