GRP5_ARATH
ID GRP5_ARATH Reviewed; 174 AA.
AC Q9LTP5; Q41191;
DT 08-JUN-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=Glycine-rich protein 5 {ECO:0000303|PubMed:2152168};
DE Short=AtGRP-5 {ECO:0000303|PubMed:2152168};
DE Short=AtGRP5 {ECO:0000303|PubMed:18657431};
DE Flags: Precursor;
GN Name=GRP5 {ECO:0000303|PubMed:2152168};
GN OrderedLocusNames=At3g20470 {ECO:0000312|Araport:AT3G20470};
GN ORFNames=MQC12.26 {ECO:0000312|EMBL:BAB02830.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:BAB02830.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION BY ABSCISIC
RP ACID AND FLOODING STRESS.
RX PubMed=2152168; DOI=10.1105/tpc.2.5.427;
RA de Oliveira D.E., Seurinck J., Inze D., Van Montagu M., Botterman J.;
RT "Differential expression of five Arabidopsis genes encoding glycine-rich
RT proteins.";
RL Plant Cell 2:427-436(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [6]
RP INDUCTION BY HPA; SALICYLIC ACID AND ABSCISIC ACID.
RX PubMed=18657431; DOI=10.1016/j.plaphy.2008.06.008;
RA Park J.H., Suh M.C., Kim T.H., Kim M.C., Cho S.H.;
RT "Expression of glycine-rich protein genes, AtGRP5 and AtGRP23, induced by
RT the cutin monomer 16-hydroxypalmitic acid in Arabidopsis thaliana.";
RL Plant Physiol. Biochem. 46:1015-1018(2008).
RN [7]
RP FUNCTION, DISRUPTION PHENOTYPE, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. C24, and cv. Columbia;
RX PubMed=19434422; DOI=10.1007/s00425-009-0940-4;
RA Mangeon A., Magioli C., Menezes-Salgueiro A.D., Cardeal V., de Oliveira C.,
RA Galvao V.C., Margis R., Engler G., Sachetto-Martins G.;
RT "AtGRP5, a vacuole-located glycine-rich protein involved in cell
RT elongation.";
RL Planta 230:253-265(2009).
RN [8]
RP DEVELOPMENTAL STAGE, AND TISSUE SPECIFICITY.
RC STRAIN=cv. C24;
RX PubMed=20195610; DOI=10.1007/s00299-010-0835-7;
RA Mangeon A., Magioli C., Tarre E., Cardeal V., Araujo C., Falkenbach E.,
RA Rocha C.A., Rangel-Lima C., Sachetto-Martins G.;
RT "The tissue expression pattern of the AtGRP5 regulatory region is
RT controlled by a combination of positive and negative elements.";
RL Plant Cell Rep. 29:461-471(2010).
CC -!- FUNCTION: Involved in organ growth by promoting cell elongation
CC processes. {ECO:0000269|PubMed:19434422}.
CC -!- SUBCELLULAR LOCATION: Vacuole {ECO:0000269|PubMed:19434422}.
CC -!- TISSUE SPECIFICITY: Mostly expressed in immature seed pods, and, to a
CC lower extent, in stems and leaves (PubMed:2152168). Present in phloem
CC and epiderm in leaves, stems, flowers and fruits (PubMed:20195610).
CC {ECO:0000269|PubMed:20195610, ECO:0000269|PubMed:2152168}.
CC -!- DEVELOPMENTAL STAGE: Expressed during somatic embryogenesis, especially
CC in cells undergoing the first anatomical modifications leading to
CC somatic embryo development. Accumulates also during zygotic embryo
CC development. First detected at heart-shape-torpedo transition in the
CC whole embryos. Developmentally regulated in cotyledons and hypocotyl,
CC being restricted to the radicule in early and late torpedo, until the
CC embryo reaches maturity. Gradual decrease at the seed coat during seed
CC development. After fertilization, restricted to the seed coat and
CC endosperm. {ECO:0000269|PubMed:20195610}.
CC -!- INDUCTION: Accumulates in response to flooding stress (PubMed:2152168).
CC Induced by salicylic acid (SA) and abscisic acid (ABA) (PubMed:2152168,
CC PubMed:18657431). Stimulated by 16-hydroxypalmitic acid (HPA), a major
CC component of cutin (PubMed:18657431). {ECO:0000269|PubMed:18657431,
CC ECO:0000269|PubMed:2152168}.
CC -!- DISRUPTION PHENOTYPE: Reduced organ length (e.g. inflorescence axis and
CC roots). {ECO:0000269|PubMed:19434422}.
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DR EMBL; S47414; AAB24077.1; -; mRNA.
DR EMBL; AB024036; BAB02830.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76383.1; -; Genomic_DNA.
DR EMBL; AB493624; BAH30462.1; -; Genomic_DNA.
DR EMBL; AY045629; AAK73987.1; -; mRNA.
DR EMBL; AY058226; AAL15400.1; -; mRNA.
DR PIR; JQ1064; JQ1064.
DR RefSeq; NP_188682.1; NM_112938.4.
DR AlphaFoldDB; Q9LTP5; -.
DR SMR; Q9LTP5; -.
DR IntAct; Q9LTP5; 1.
DR STRING; 3702.AT3G20470.1; -.
DR PaxDb; Q9LTP5; -.
DR EnsemblPlants; AT3G20470.1; AT3G20470.1; AT3G20470.
DR GeneID; 3768804; -.
DR Gramene; AT3G20470.1; AT3G20470.1; AT3G20470.
DR KEGG; ath:AT3G20470; -.
DR Araport; AT3G20470; -.
DR TAIR; locus:2092394; AT3G20470.
DR eggNOG; ENOG502RCT3; Eukaryota.
DR HOGENOM; CLU_1463277_0_0_1; -.
DR InParanoid; Q9LTP5; -.
DR OMA; IMIMSAV; -.
DR OrthoDB; 1636926at2759; -.
DR PRO; PR:Q9LTP5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LTP5; baseline and differential.
DR GO; GO:0009505; C:plant-type cell wall; TAS:TAIR.
DR GO; GO:0000325; C:plant-type vacuole; IDA:UniProtKB.
DR GO; GO:0005199; F:structural constituent of cell wall; TAS:TAIR.
DR GO; GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.
DR GO; GO:0046622; P:positive regulation of organ growth; IMP:UniProtKB.
DR GO; GO:0009737; P:response to abscisic acid; IEP:UniProtKB.
DR GO; GO:0009413; P:response to flooding; IEP:UniProtKB.
DR GO; GO:0009751; P:response to salicylic acid; IEP:TAIR.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal; Vacuole.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..174
FT /note="Glycine-rich protein 5"
FT /evidence="ECO:0000255"
FT /id="PRO_5006752047"
FT CONFLICT 1
FT /note="Missing (in Ref. 1; AAB24077)"
FT /evidence="ECO:0000305"
FT CONFLICT 44
FT /note="G -> S (in Ref. 1; AAB24077)"
FT /evidence="ECO:0000305"
FT CONFLICT 99
FT /note="S -> G (in Ref. 1; AAB24077)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 174 AA; 13718 MW; 196DF768A69EA176 CRC64;
MASKSLFLVA LLVGSFAFTS FASVANRKLK SGLEDQKTFF HHPGGGLGGG GGIGGGSGLG
GGGGFGGGGG LGGGAGGGGG LGGGAGGGAG GGFGGGAGSG GGLGGGGGAG GGFGGGAGGG
SGGGFGGGAG AGGGLGGGGG AGGGGGFGGG GGSGIGGGFG GGAGAGGGFG GGHH
