GSPB_DICD3
ID GSPB_DICD3 Reviewed; 220 AA.
AC Q01563; E0SM44;
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-1998, sequence version 2.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=General secretion pathway protein B;
GN Name=outB; OrderedLocusNames=Dda3937_02412;
OS Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Dickeya.
OX NCBI_TaxID=198628;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=3937;
RX PubMed=1453958; DOI=10.1111/j.1365-2958.1992.tb01775.x;
RA Condemine G., Dorel C., Hugouvieux-Cotte-Pattat N., Robert-Baudouy J.;
RT "Some of the out genes involved in the secretion of pectate lyases in
RT Erwinia chrysanthemi are regulated by kdgR.";
RL Mol. Microbiol. 6:3199-3211(1992).
RN [2]
RP SEQUENCE REVISION.
RA Condemine G.;
RL Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3937;
RX PubMed=21217001; DOI=10.1128/jb.01513-10;
RA Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N.,
RA Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D.,
RA Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K.,
RA Rauscher L., Rodriguez-Palenzuela P., Toussaint A., Holeva M.C., He S.Y.,
RA Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S.,
RA Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S.,
RA Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M.,
RA Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R.,
RA Blattner F.R., Keen N.T., Perna N.T.;
RT "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.";
RL J. Bacteriol. 193:2076-2077(2011).
CC -!- FUNCTION: Out proteins are required for the translocation of pectate
CC lyases and cellulases across the outer membrane.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Single-pass
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the ExeB/OutB/PulB family. {ECO:0000305}.
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DR EMBL; X65265; CAA46373.1; -; Genomic_DNA.
DR EMBL; CP002038; ADM99379.1; -; Genomic_DNA.
DR RefSeq; WP_013318813.1; NC_014500.1.
DR PDB; 4WFW; X-ray; 2.05 A; A=112-201.
DR PDBsum; 4WFW; -.
DR AlphaFoldDB; Q01563; -.
DR SMR; Q01563; -.
DR STRING; 198628.Dda3937_02412; -.
DR EnsemblBacteria; ADM99379; ADM99379; Dda3937_02412.
DR GeneID; 9734628; -.
DR KEGG; ddd:Dda3937_02412; -.
DR PATRIC; fig|198628.6.peg.3140; -.
DR eggNOG; COG3266; Bacteria.
DR HOGENOM; CLU_1426772_0_0_6; -.
DR OMA; DSLQDWP; -.
DR OrthoDB; 1461076at2; -.
DR BioCyc; DDAD198628:DDA3937_RS14815-MON; -.
DR Proteomes; UP000006859; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
DR GO; GO:0016485; P:protein processing; IMP:ASAP.
DR InterPro; IPR032389; GspB.
DR Pfam; PF16537; T2SSB; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cell inner membrane; Cell membrane; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..220
FT /note="General secretion pathway protein B"
FT /id="PRO_0000214996"
FT TRANSMEM 17..37
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 85..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 188..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..110
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT STRAND 132..136
FT /evidence="ECO:0007829|PDB:4WFW"
FT HELIX 141..143
FT /evidence="ECO:0007829|PDB:4WFW"
FT STRAND 145..148
FT /evidence="ECO:0007829|PDB:4WFW"
FT STRAND 151..153
FT /evidence="ECO:0007829|PDB:4WFW"
FT STRAND 163..168
FT /evidence="ECO:0007829|PDB:4WFW"
FT STRAND 170..177
FT /evidence="ECO:0007829|PDB:4WFW"
FT STRAND 180..185
FT /evidence="ECO:0007829|PDB:4WFW"
SQ SEQUENCE 220 AA; 23486 MW; D094FE2DC0931978 CRC64;
MKNTPEVKAS PQTGYRIPGY LLVVYALLLF TLGWFGHQRW ADISPIPLST SAAAIAAPPT
KVGMVPASTA VTADENHPGS LHAAAENSAT QTAASGSQTS ASSQEATPDT KPAKLVTGWQ
TAKPGELPYI AFSAHVYTSA PDKRSVTLNG ERYREGDSPY QGLVIEQIEQ DMVIFSFNGE
PFILDSLQDW PGGKPGDDAA QGNEQEPTSK PEQTVRTTKK