GT2_ORYSJ
ID GT2_ORYSJ Reviewed; 480 AA.
AC Q6H765; A0A0P0VJV6;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Probable glycosyltransferase 2 {ECO:0000305};
DE Short=OsGT2 {ECO:0000303|PubMed:24834920};
DE EC=2.4.-.- {ECO:0000305};
GN Name=GT2 {ECO:0000303|PubMed:24834920};
GN OrderedLocusNames=Os02g0529600 {ECO:0000312|EMBL:BAF08928.1},
GN LOC_Os02g32750 {ECO:0000305};
GN ORFNames=OsJ_06989 {ECO:0000312|EMBL:EEE57116.1},
GN P0476H10.24 {ECO:0000312|EMBL:BAD25434.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP INDUCTION BY ATRAZINE.
RX PubMed=24042130; DOI=10.1016/j.gene.2013.09.004;
RA Lu Y.C., Yang S.N., Zhang J.J., Zhang J.J., Tan L.R., Yang H.;
RT "A collection of glycosyltransferases from rice (Oryza sativa) exposed to
RT atrazine.";
RL Gene 531:243-252(2013).
RN [7]
RP NOMENCLATURE.
RX PubMed=24834920; DOI=10.1093/jxb/eru189;
RA Wang C., Li S., Ng S., Zhang B., Zhou Y., Whelan J., Wu P., Shou H.;
RT "Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair
RT development in Oryza sativa.";
RL J. Exp. Bot. 65:4149-4157(2014).
CC -!- FUNCTION: Probable glycosyltransferase that may be involved in the
CC biosynthesis of xyloglucan. {ECO:0000250|UniProtKB:Q10MQ0}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Single-
CC pass type II membrane protein {ECO:0000305}.
CC -!- INDUCTION: By treatment with atrazine. {ECO:0000269|PubMed:24042130}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 34 family.
CC {ECO:0000305}.
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DR EMBL; AP004790; BAD25434.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF08928.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS79020.1; -; Genomic_DNA.
DR EMBL; CM000139; EEE57116.1; -; Genomic_DNA.
DR EMBL; AK100984; BAG94866.1; -; mRNA.
DR RefSeq; XP_015627055.1; XM_015771569.1.
DR RefSeq; XP_015627056.1; XM_015771570.1.
DR AlphaFoldDB; Q6H765; -.
DR SMR; Q6H765; -.
DR STRING; 4530.OS02T0529600-01; -.
DR CAZy; GT34; Glycosyltransferase Family 34.
DR PaxDb; Q6H765; -.
DR PRIDE; Q6H765; -.
DR EnsemblPlants; Os02t0529600-01; Os02t0529600-01; Os02g0529600.
DR Gramene; Os02t0529600-01; Os02t0529600-01; Os02g0529600.
DR KEGG; osa:4329539; -.
DR eggNOG; KOG4748; Eukaryota.
DR HOGENOM; CLU_034328_1_0_1; -.
DR InParanoid; Q6H765; -.
DR OMA; VENLDMK; -.
DR OrthoDB; 629667at2759; -.
DR PlantReactome; R-OSA-5655101; Xyloglucan biosynthesis.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6H765; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016758; F:hexosyltransferase activity; IBA:GO_Central.
DR GO; GO:0009969; P:xyloglucan biosynthetic process; IBA:GO_Central.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR008630; Glyco_trans_34.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR PANTHER; PTHR31311; PTHR31311; 1.
DR Pfam; PF05637; Glyco_transf_34; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Glycosyltransferase; Golgi apparatus; Membrane;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..480
FT /note="Probable glycosyltransferase 2"
FT /id="PRO_0000434325"
FT TOPO_DOM 1..49
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 50..72
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 73..480
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 74
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 124
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 129
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 458
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 480 AA; 53424 MW; 7E45667AB6EE95DA CRC64;
MGQEGMGYNN GKGGGGGGGG LPMTAPRPRG ASPLSSHGHH HRSRKIHRTF NNVKITVLCG
LVTILVLRGT IGLNLSLPNQ PTDADALAGA KAVEDIDRIL REIRSDGGAD DDAAAAGDLA
GSFNATALNA TEAAAAYASA VERYALGPKI SDWDGQRRRW LRQNPGFPST VAGGKPRILL
VTGSQPGPCD NPLGDHYLLK TTKNKIDYCR LHGIEIVHNL AHLDTELAGY WAKLPLLRRL
MLSHPEVEWI WWMDSDALFT DMAFELPLSR YQDRNLIIHG YQDLLFEKHS WIALNTGSFL
FRNCQWSLDL LDAWAPMGPK GFIRDEAGKI LTANLKGRPA FEADDQSALI YLLLSQKEKW
MNKVFIENSY YLHGFWAGLV DKYEEMMENH HPGLGDERWP FVTHFVGCKP CGSYGDYPVE
RCLRSMERAF NFADNQVLRL YGFAHKGLES PKIKRVRNQT TKPIDDKENL DVKAKISTTS
