ID   GT42_ORYSJ              Reviewed;         420 AA.
AC   Q7XLG3; A0A0P0W9R8;
DT   03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2004, sequence version 2.
DT   03-AUG-2022, entry version 102.
DE   RecName: Full=Probable glucuronosyltransferase Os04g0398600;
DE            EC=2.4.-.-;
GN   OrderedLocusNames=Os04g0398600, LOC_Os04g32670;
GN   ORFNames=OsJ_14642, OSJNBa0039C07.13;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447439; DOI=10.1038/nature01183;
RA   Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA   Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA   Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA   Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA   Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA   Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA   Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA   Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA   Li J., Hong G., Xue Y., Han B.;
RT   "Sequence and analysis of rice chromosome 4.";
RL   Nature 420:316-320(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Involved in the synthesis of glucuronoxylan hemicellulose in
CC       secondary cell walls. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000250}; Single-
CC       pass type II membrane protein {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase 47 family.
CC       {ECO:0000305}.
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DR   EMBL; AL731591; CAE05157.2; -; Genomic_DNA.
DR   EMBL; AP008210; BAF14587.1; -; Genomic_DNA.
DR   EMBL; AP014960; BAS89024.1; -; Genomic_DNA.
DR   EMBL; CM000141; EAZ30593.1; -; Genomic_DNA.
DR   EMBL; AK073335; BAG93402.1; -; mRNA.
DR   EMBL; AK107473; BAG98058.1; -; mRNA.
DR   RefSeq; XP_015635699.1; XM_015780213.1.
DR   AlphaFoldDB; Q7XLG3; -.
DR   STRING; 4530.OS04T0398600-02; -.
DR   CAZy; GT47; Glycosyltransferase Family 47.
DR   PaxDb; Q7XLG3; -.
DR   PRIDE; Q7XLG3; -.
DR   EnsemblPlants; Os04t0398600-01; Os04t0398600-01; Os04g0398600.
DR   EnsemblPlants; Os04t0398600-02; Os04t0398600-02; Os04g0398600.
DR   GeneID; 4335711; -.
DR   Gramene; Os04t0398600-01; Os04t0398600-01; Os04g0398600.
DR   Gramene; Os04t0398600-02; Os04t0398600-02; Os04g0398600.
DR   KEGG; osa:4335711; -.
DR   eggNOG; KOG1021; Eukaryota.
DR   HOGENOM; CLU_039682_1_0_1; -.
DR   InParanoid; Q7XLG3; -.
DR   OMA; EHAVQQH; -.
DR   OrthoDB; 789556at2759; -.
DR   Proteomes; UP000000763; Chromosome 4.
DR   Proteomes; UP000007752; Chromosome 4.
DR   Proteomes; UP000059680; Chromosome 4.
DR   ExpressionAtlas; Q7XLG3; baseline and differential.
DR   Genevisible; Q7XLG3; OS.
DR   GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0010417; P:glucuronoxylan biosynthetic process; IBA:GO_Central.
DR   GO; GO:0009834; P:plant-type secondary cell wall biogenesis; IBA:GO_Central.
DR   GO; GO:0006486; P:protein glycosylation; IEA:InterPro.
DR   InterPro; IPR004263; Exostosin.
DR   InterPro; IPR040911; Exostosin_GT47.
DR   PANTHER; PTHR11062; PTHR11062; 1.
DR   Pfam; PF03016; Exostosin; 1.
PE   2: Evidence at transcript level;
KW   Cell wall biogenesis/degradation; Glycoprotein; Glycosyltransferase;
KW   Golgi apparatus; Membrane; Reference proteome; Signal-anchor; Transferase;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..420
FT                   /note="Probable glucuronosyltransferase Os04g0398600"
FT                   /id="PRO_0000407572"
FT   TOPO_DOM        1..4
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        5..25
FT                   /note="Helical; Signal-anchor for type II membrane protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        26..420
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        147
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        408
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   420 AA;  47476 MW;  D974433F7D430748 CRC64;
     MGSRTVGWWL LAAAVVLAAA AADSGEAERA AEQHSERISG SAGDVLEDNP VGRLKVFIYD
     LPRKYNKKMV NKDPRCLNHM FAAEIFMHRF LLSSAVRTLN PKEADWFYTP VYTTCDLTPA
     GLPLPFKSPR VMRSAIQYIS HKWPFWNRTD GADHFFVVPH DFGACFHYQE EKAIERGILP
     LLQRATLVQT FGQENHVCLK EGSITIPPYA PPQKMQAHLI PPDTPRSIFV YFRGLFYDTG
     NDPEGGYYAR GARASLWENF KNNPLFDIST DHPPTYYEDM QRAVFCLCPL GWAPWSPRLV
     EAVVFGCIPV IIADDIVLPF ADAIPWEEIG VFVEEKDVPK LDTILTSMPI DDILRKQRLL
     ANPSMKQAML FPQPAQPRDA FHQILNGLAR KLPHPEGVYL QPSDKRLNWT AGPVGDLKAW