ID   GT43A_ORYSJ             Reviewed;         371 AA.
AC   Q75L84; A0A023ND31;
DT   03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 98.
DE   RecName: Full=Probable beta-1,4-xylosyltransferase GT43A {ECO:0000305};
DE            EC=2.4.2.- {ECO:0000305};
DE   AltName: Full=OsGT43A {ECO:0000303|PubMed:24525904};
DE   AltName: Full=Probable glucuronosyltransferase Os05g0123100 {ECO:0000305};
GN   Name=GT43A {ECO:0000303|PubMed:24525904};
GN   OrderedLocusNames=Os05g0123100 {ECO:0000312|EMBL:BAS92047.1},
GN   LOC_Os05g03174 {ECO:0000305};
GN   ORFNames=OJ1729_E02.10 {ECO:0000312|EMBL:AHW98781.1},
GN   P0008A07.2 {ECO:0000312|EMBL:AAV33308.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=24525904; DOI=10.4161/psb.27809;
RA   Lee C., Teng Q., Zhong R., Yuan Y., Ye Z.H.;
RT   "Functional roles of rice glycosyltransferase family GT43 in xylan
RT   biosynthesis.";
RL   Plant Signal. Behav. 9:E27809-E27809(2014).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA   Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA   Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA   Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT   "A fine physical map of the rice chromosome 5.";
RL   Mol. Genet. Genomics 274:337-345(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [5]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Probable beta-1,4-xylosyltransferase involved in xylan
CC       biosynthesis in cell walls. {ECO:0000269|PubMed:24525904}.
CC   -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC       {ECO:0000269|PubMed:24525904}; Single-pass type II membrane protein
CC       {ECO:0000305|PubMed:24525904}.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase 43 family.
CC       {ECO:0000305}.
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DR   EMBL; KJ206898; AHW98781.1; -; mRNA.
DR   EMBL; AC079021; AAV33308.1; -; Genomic_DNA.
DR   EMBL; AC093089; AAS72361.1; -; Genomic_DNA.
DR   EMBL; AP008211; BAF16424.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS92047.1; -; Genomic_DNA.
DR   EMBL; AK120892; BAH00218.1; -; mRNA.
DR   RefSeq; XP_015640167.1; XM_015784681.1.
DR   AlphaFoldDB; Q75L84; -.
DR   SMR; Q75L84; -.
DR   STRING; 4530.OS05T0123100-01; -.
DR   CAZy; GT43; Glycosyltransferase Family 43.
DR   PaxDb; Q75L84; -.
DR   PRIDE; Q75L84; -.
DR   EnsemblPlants; Os05t0123100-01; Os05t0123100-01; Os05g0123100.
DR   GeneID; 4337665; -.
DR   Gramene; Os05t0123100-01; Os05t0123100-01; Os05g0123100.
DR   KEGG; osa:4337665; -.
DR   eggNOG; KOG1476; Eukaryota.
DR   HOGENOM; CLU_044006_2_0_1; -.
DR   InParanoid; Q75L84; -.
DR   OMA; TRGVSIW; -.
DR   OrthoDB; 901158at2759; -.
DR   PlantReactome; R-OSA-5654909; Xylan biosynthesis.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   Genevisible; Q75L84; OS.
DR   GO; GO:0000139; C:Golgi membrane; IDA:UniProtKB.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0015018; F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity; IEA:InterPro.
DR   GO; GO:0042285; F:xylosyltransferase activity; IBA:GO_Central.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IBA:GO_Central.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0010417; P:glucuronoxylan biosynthetic process; IBA:GO_Central.
DR   GO; GO:0009834; P:plant-type secondary cell wall biogenesis; IBA:GO_Central.
DR   GO; GO:0045492; P:xylan biosynthetic process; IDA:UniProtKB.
DR   Gene3D; 3.90.550.10; -; 1.
DR   InterPro; IPR005027; Glyco_trans_43.
DR   InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR   PANTHER; PTHR10896; PTHR10896; 1.
DR   Pfam; PF03360; Glyco_transf_43; 1.
DR   SUPFAM; SSF53448; SSF53448; 1.
PE   2: Evidence at transcript level;
KW   Cell wall biogenesis/degradation; Glycoprotein; Glycosyltransferase;
KW   Golgi apparatus; Membrane; Reference proteome; Signal-anchor; Transferase;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..371
FT                   /note="Probable beta-1,4-xylosyltransferase GT43A"
FT                   /id="PRO_0000407558"
FT   TOPO_DOM        1..19
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        20..42
FT                   /note="Helical; Signal-anchor for type II membrane protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        43..371
FT                   /note="Lumenal"
FT                   /evidence="ECO:0000305"
FT   CARBOHYD        176
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        299
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   371 AA;  40177 MW;  305E4720EC64CAC5 CRC64;
     MGTAAVAAAE RPKQRRSSHL WKKALLHFSL CFVMGFFTGF APSSSSSWRA GSGGGGGVQP
     RHQLAASHVA VNQQVSLVPD AAAAEAAGVG NGAVVDVGDD EGGEGARRML IVVTTTRGER
     RRRRGELLRL AHTLRLVRPP VVWVVVEPAA DAAATAEVLR GTGVMYRHLA FRPEENFTTA
     DAEAHAQRNA ALAHVEKHRL SGVVHFADAA GVYDAHFFDE IRQIEAFGTW PVATMSAGEK
     KVVVEGPLCS DSKVVGWFSR DFNDGTTRAV TYNTEADLNP AGAAGTRAHT IDVSGFAFNS
     SILWDPERWG RPTSLPDTSQ DSIKFVQEVV LEDRTKLKGI PSDCSQIMVW QYTMPMQVHA
     QTSTPKTHNR R