GT6_ORYSJ
ID GT6_ORYSJ Reviewed; 483 AA.
AC Q2R2W8; A0A0P0Y3J3;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Probable glycosyltransferase 6 {ECO:0000305};
DE Short=OsGT6 {ECO:0000303|PubMed:24834920};
DE EC=2.4.-.- {ECO:0000305};
GN Name=GT6 {ECO:0000303|PubMed:24834920};
GN OrderedLocusNames=Os11g0546500 {ECO:0000312|EMBL:BAF28429.1},
GN LOC_Os11g34390 {ECO:0000312|EMBL:ABA94224.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP INDUCTION.
RX PubMed=24042130; DOI=10.1016/j.gene.2013.09.004;
RA Lu Y.C., Yang S.N., Zhang J.J., Zhang J.J., Tan L.R., Yang H.;
RT "A collection of glycosyltransferases from rice (Oryza sativa) exposed to
RT atrazine.";
RL Gene 531:243-252(2013).
RN [6]
RP NOMENCLATURE.
RX PubMed=24834920; DOI=10.1093/jxb/eru189;
RA Wang C., Li S., Ng S., Zhang B., Zhou Y., Whelan J., Wu P., Shou H.;
RT "Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair
RT development in Oryza sativa.";
RL J. Exp. Bot. 65:4149-4157(2014).
CC -!- FUNCTION: Probable glycosyltransferase that may be involved in the
CC biosynthesis of xyloglucan. {ECO:0000250|UniProtKB:Q10MQ0}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Single-
CC pass type II membrane protein {ECO:0000305}.
CC -!- INDUCTION: Down-regulated by treatment with atrazine.
CC {ECO:0000269|PubMed:24042130}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 34 family.
CC {ECO:0000305}.
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DR EMBL; DP000010; ABA94224.1; -; Genomic_DNA.
DR EMBL; AP008217; BAF28429.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT14385.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2R2W8; -.
DR SMR; Q2R2W8; -.
DR STRING; 4530.OS11T0546500-00; -.
DR CAZy; GT34; Glycosyltransferase Family 34.
DR PaxDb; Q2R2W8; -.
DR PRIDE; Q2R2W8; -.
DR EnsemblPlants; Os11t0546500-00; Os11t0546500-00; Os11g0546500.
DR Gramene; Os11t0546500-00; Os11t0546500-00; Os11g0546500.
DR eggNOG; KOG4748; Eukaryota.
DR HOGENOM; CLU_034328_0_0_1; -.
DR InParanoid; Q2R2W8; -.
DR OMA; MDLIDTW; -.
DR PlantReactome; R-OSA-5655101; Xyloglucan biosynthesis.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR Genevisible; Q2R2W8; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008378; F:galactosyltransferase activity; IBA:GO_Central.
DR GO; GO:0016758; F:hexosyltransferase activity; IBA:GO_Central.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR008630; Glyco_trans_34.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR PANTHER; PTHR31311; PTHR31311; 1.
DR Pfam; PF05637; Glyco_transf_34; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Glycosyltransferase; Golgi apparatus; Membrane;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..483
FT /note="Probable glycosyltransferase 6"
FT /id="PRO_0000434333"
FT TOPO_DOM 1..40
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 41..61
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 62..483
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT CARBOHYD 144
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 483 AA; 52904 MW; 2CA5CE156CCD44F8 CRC64;
MAASETAPFG VSAASKGGGG VAGARAQHGQ LAVAGRVHDA LVFAAGAVAA VLVLLATASF
LSPMPVTNLV AFRSLPVSVA STSAASAAID ADVGVRGGPG AAGRTFYDDS RVSYAVEVGR
RGGITGWDAR RAAWMRLRYP RGLNATAAGR ERVVMVSGSQ APPCRGEGGD HLLFRFLKNK
VDYCRLHGVE LLYNNALLQP RMLAYWAKIP AVRAAMLAHP DAEWVWWVDA DAVFTDMDFS
LPLHKYKDHN LVVYGWNKEV YGERSWVGLN AGVFLIRNCQ WSLDFMDAWA RMGPASPEYA
RWGSVLHDTL RGKSDKESDD QSALVYLLSE HEEKWGAKTY LEKGYFFQGY WVEVVDRLDD
IAARYEAAER RPSAAAAHLR RRHAEREHER YAAARNAAVR GAVPGPAGGG QSGWRRPFVT
HFTGCQPCGG EPNKIYSKKS CADGMNRALN FADDQVLRNY GYRHKDPLSD EVRPLPFDYP
AAR
