GTDC1_DANRE
ID GTDC1_DANRE Reviewed; 433 AA.
AC Q568B7; B0S8J7;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Glycosyltransferase-like domain-containing protein 1;
GN Name=gtdc1; ORFNames=si:dkey-52o2.3, zgc:110568;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyltransferase group 1 family.
CC Glycosyltransferase 4 subfamily. {ECO:0000305}.
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DR EMBL; BX936460; CAQ15307.1; -; Genomic_DNA.
DR EMBL; CR925716; CAQ15307.1; JOINED; Genomic_DNA.
DR EMBL; CR925716; CAQ14815.1; -; Genomic_DNA.
DR EMBL; BX936460; CAQ14815.1; JOINED; Genomic_DNA.
DR EMBL; BC092932; AAH92932.1; -; mRNA.
DR RefSeq; NP_001017560.1; NM_001017560.1.
DR AlphaFoldDB; Q568B7; -.
DR STRING; 7955.ENSDARP00000016818; -.
DR CAZy; GT4; Glycosyltransferase Family 4.
DR PaxDb; Q568B7; -.
DR Ensembl; ENSDART00000024572; ENSDARP00000016818; ENSDARG00000020642.
DR Ensembl; ENSDART00000127135; ENSDARP00000109130; ENSDARG00000020642.
DR GeneID; 550132; -.
DR KEGG; dre:550132; -.
DR CTD; 79712; -.
DR ZFIN; ZDB-GENE-050417-8; gtdc1.
DR eggNOG; ENOG502QQJ3; Eukaryota.
DR GeneTree; ENSGT00390000006631; -.
DR HOGENOM; CLU_033439_1_0_1; -.
DR InParanoid; Q568B7; -.
DR OMA; HRWEYDK; -.
DR OrthoDB; 583461at2759; -.
DR PhylomeDB; Q568B7; -.
DR TreeFam; TF324818; -.
DR PRO; PR:Q568B7; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 9.
DR Bgee; ENSDARG00000020642; Expressed in blastula and 24 other tissues.
DR ExpressionAtlas; Q568B7; baseline.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:InterPro.
DR GO; GO:0007417; P:central nervous system development; IMP:ZFIN.
DR InterPro; IPR001296; Glyco_trans_1.
DR InterPro; IPR022701; GlycosylTrfase_1_N.
DR Pfam; PF12038; DUF3524; 1.
DR Pfam; PF00534; Glycos_transf_1; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..433
FT /note="Glycosyltransferase-like domain-containing protein
FT 1"
FT /id="PRO_0000311092"
FT REGION 194..244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..238
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 54
FT /note="P -> L (in Ref. 2; AAH92932)"
FT /evidence="ECO:0000305"
FT CONFLICT 432
FT /note="M -> L (in Ref. 2; AAH92932)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 433 AA; 49737 MW; 237CE823458A5849 CRC64;
MSVLLLEAFY GGSHKQLLDL LKESVEDCVS FTLPAKKWHW RARTSALYFM QAVPANSSYR
VLFTSSVLNL AELVALRPDL GHLKKVLYFH ENQLVYPVRK SQERDFQYGY NQILSCLVAD
VVVFNSSFNM ESFLSSISTF MKTMPDHRPK DLERLIRPKC HVLHFPIRFP DVTRFLPAHK
RLRHPVRCDD IHAPAAKSHI QTSSPSSYPD VEPPEKMLNV AGTNQSHEPT SVTPHQETAS
PLCGHEGEKL RPLHIVWPHR WEHDKDPQLF FQTLLKLKDR QLSFEVSVLG ETFTDVPDIF
SEAKEQLVDH IQHWGFMPSK EDYLKVLCQA DVVVSTAKHE FFGVAMLEAV HCGCYPLCPK
ALVYPEIFPA TYLYSTPEQL CKRLQEFCKR PQLARQHVVQ VSLSSFSWDS LGDNFRSLLK
ADSGRMFTDK HMA