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GTE12_ARATH
ID   GTE12_ARATH             Reviewed;         494 AA.
AC   Q9LS28; Q8GXL8;
DT   05-APR-2011, integrated into UniProtKB/Swiss-Prot.
DT   05-APR-2011, sequence version 2.
DT   03-AUG-2022, entry version 106.
DE   RecName: Full=Transcription factor GTE12;
DE   AltName: Full=Bromodomain-containing protein GTE12;
DE   AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12;
GN   Name=GTE12; OrderedLocusNames=At5g46550; ORFNames=F10E10.2;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11910074; DOI=10.1126/science.1071006;
RA   Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA   Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA   Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA   Shinagawa A., Shinozaki K.;
RT   "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL   Science 296:141-145(2002).
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12466527; DOI=10.1093/nar/gkf660;
RA   Pandey R., Mueller A., Napoli C.A., Selinger D.A., Pikaard C.S.,
RA   Richards E.J., Bender J., Mount D.W., Jorgensen R.A.;
RT   "Analysis of histone acetyltransferase and histone deacetylase families of
RT   Arabidopsis thaliana suggests functional diversification of chromatin
RT   modification among multicellular eukaryotes.";
RL   Nucleic Acids Res. 30:5036-5055(2002).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA97526.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AB028605; BAA97526.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002688; AED95397.1; -; Genomic_DNA.
DR   EMBL; AK118168; BAC42791.1; -; mRNA.
DR   RefSeq; NP_199467.2; NM_124025.4.
DR   AlphaFoldDB; Q9LS28; -.
DR   SMR; Q9LS28; -.
DR   STRING; 3702.AT5G46550.1; -.
DR   iPTMnet; Q9LS28; -.
DR   PaxDb; Q9LS28; -.
DR   PRIDE; Q9LS28; -.
DR   ProteomicsDB; 247228; -.
DR   EnsemblPlants; AT5G46550.1; AT5G46550.1; AT5G46550.
DR   GeneID; 834698; -.
DR   Gramene; AT5G46550.1; AT5G46550.1; AT5G46550.
DR   KEGG; ath:AT5G46550; -.
DR   Araport; AT5G46550; -.
DR   TAIR; locus:2142305; AT5G46550.
DR   eggNOG; KOG1474; Eukaryota.
DR   HOGENOM; CLU_007920_2_0_1; -.
DR   InParanoid; Q9LS28; -.
DR   OMA; RIICICL; -.
DR   OrthoDB; 1407769at2759; -.
DR   PhylomeDB; Q9LS28; -.
DR   PRO; PR:Q9LS28; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LS28; baseline and differential.
DR   Genevisible; Q9LS28; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   CDD; cd05506; Bromo_plant1; 1.
DR   Gene3D; 1.20.920.10; -; 1.
DR   InterPro; IPR001487; Bromodomain.
DR   InterPro; IPR036427; Bromodomain-like_sf.
DR   InterPro; IPR037377; GTE_bromo.
DR   Pfam; PF00439; Bromodomain; 1.
DR   PRINTS; PR00503; BROMODOMAIN.
DR   SMART; SM00297; BROMO; 1.
DR   SUPFAM; SSF47370; SSF47370; 1.
DR   PROSITE; PS50014; BROMODOMAIN_2; 1.
PE   2: Evidence at transcript level;
KW   Bromodomain; Coiled coil; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..494
FT                   /note="Transcription factor GTE12"
FT                   /id="PRO_0000406343"
FT   DOMAIN          81..153
FT                   /note="Bromo"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00035"
FT   REGION          33..61
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          191..237
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          286..318
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          366..428
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        197..237
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   494 AA;  55619 MW;  A27343ED5203B346 CRC64;
     MVAIPNIKIK FGPQGSVRTF QTLSDSSKKI EHVVTEDLSQ SSEKSKKRGG PKELDEVQPK
     KKQRLDCDWS SQCLALLRFL MEHRGGWLFK EPVDPVKMEI PDYFNVIQKP MDLGTVKSKL
     LKNVYSNADE FAADVRLTFA NAMHYNPLWN EVHTIAKEIN EIFEVRWESL MKKKVLRLSW
     NEVREGYKRQ PVERDCSRRS STGTSASSGV GLTKPAKENS EKGSLSSKPV KVQSKKNTPA
     VTPKALATCK CGRIICICLK SCSSFGSDVC SLTDCQLKNI SGAQASELDP QSNGSDTSKK
     ERNGSLKSQL DKPSNSDLLG NELKTAFPAL PPVPPEKALR AAILKAQYAG TIIKAKHRIV
     LGQNNKADLI RIQIEKEQME RAQREEKARI EAEMRAAKVA ERMRAQDELK QKRESQRLEI
     AKMKKGFDFE RNNHSKLKKK FVKVCGCFSL TKARLLLEEL GLVLKNDYCP ELEVIGSEKF
     DAMRMDDLEE GEIL
 
 
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