AMP_POCDA
ID AMP_POCDA Reviewed; 107 AA.
AC F1DFM9; A0A3M6U162;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 03-MAY-2011, sequence version 1.
DT 25-MAY-2022, entry version 12.
DE RecName: Full=Antimicrobial peptide damicornin {ECO:0000303|PubMed:21536670};
DE Flags: Precursor;
OS Pocillopora damicornis (Cauliflower coral) (Millepora damicornis).
OC Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
OC Astrocoeniina; Pocilloporidae; Pocillopora.
OX NCBI_TaxID=46731;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SYNTHESIS OF 68-106, AMIDATION AT
RP ARG-106, DISULFIDE BONDS, AND MASS SPECTROMETRY.
RX PubMed=21536670; DOI=10.1074/jbc.m110.216358;
RA Vidal-Dupiol J., Ladriere O., Destoumieux-Garzon D., Sautiere P.E.,
RA Meistertzheim A.L., Tambutte E., Tambutte S., Duval D., Foure L.,
RA Adjeroud M., Mitta G.;
RT "Innate immune responses of a scleractinian coral to vibriosis.";
RL J. Biol. Chem. 286:22688-22698(2011).
RN [2] {ECO:0000312|EMBL:RMX47400.1, ECO:0000312|Proteomes:UP000275408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RSMAS {ECO:0000312|EMBL:RMX47400.1};
RX PubMed=30382153; DOI=10.1038/s41598-018-34459-8;
RA Cunning R., Bay R.A., Gillette P., Baker A.C., Traylor-Knowles N.;
RT "Comparative analysis of the Pocillopora damicornis genome highlights role
RT of immune system in coral evolution.";
RL Sci. Rep. 8:16134-16134(2018).
CC -!- FUNCTION: Cationic peptide with probable antimicrobial activity against
CC coral pathogens. Shows in vitro activity against Gram-positive bacteria
CC and the filamentous fungus F.oxysporum (MIC=1.25 uM). Gram-positive
CC bacteria tested are B.megaterium (MIC=20 uM), S.aureus (MIC=5 uM), M.
CC luteus (MIC=1.25 uM), B.stationis (MIC=10 uM), M.maritypicum (MIC=20
CC uM). Has no or little effect against Gram-negative bacteria (the coral
CC pathogen V.coralliilyticus (MIC>20 uM), V.aesturianus (MIC>20 uM),
CC V.shiloi (MIC>20 uM), and E.coli (MIC=10 uM)). Has no hemolytic
CC activity against sheep erythrocytes. {ECO:0000269|PubMed:21536670}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, Stress granule
CC {ECO:0000305|PubMed:21536670}. Secreted {ECO:0000305|PubMed:21536670}.
CC -!- TISSUE SPECIFICITY: Is specifically expressed in the granular cells of
CC the ectoderm. {ECO:0000269|PubMed:21536670}.
CC -!- INDUCTION: Transiently up-regulated (6-fold) after challenge with the
CC coral pathogen V.coralliilyticus and dramatically repressed (50-fold)
CC thereafter. {ECO:0000269|PubMed:21536670}.
CC -!- MASS SPECTROMETRY: Mass=4492.74; Method=MALDI; Note=Average mass.;
CC Evidence={ECO:0000269|PubMed:21536670};
CC -!- SIMILARITY: Belongs to the coral AMP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=RMX47400.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; HQ825099; ADV51532.1; -; mRNA.
DR EMBL; RCHS01002422; RMX47400.1; ALT_INIT; Genomic_DNA.
DR AlphaFoldDB; F1DFM9; -.
DR Proteomes; UP000275408; Unassembled WGS sequence.
DR GO; GO:0010494; C:cytoplasmic stress granule; IEA:UniProtKB-SubCell.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.
DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR GO; GO:0031640; P:killing of cells of another organism; IEA:UniProtKB-KW.
PE 1: Evidence at protein level;
KW Amidation; Antibiotic; Antimicrobial; Cleavage on pair of basic residues;
KW Cytoplasm; Disulfide bond; Fungicide; Immunity; Innate immunity;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT PROPEP 23..67
FT /evidence="ECO:0000305|PubMed:21536670"
FT /id="PRO_0000452121"
FT CHAIN 68..106
FT /note="Antimicrobial peptide damicornin"
FT /evidence="ECO:0000269|PubMed:21536670"
FT /id="PRO_5003264075"
FT REGION 37..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 106
FT /note="Arginine amide"
FT /evidence="ECO:0000269|PubMed:21536670"
FT DISULFID 69..105
FT /evidence="ECO:0000269|PubMed:21536670"
FT DISULFID 78..99
FT /evidence="ECO:0000269|PubMed:21536670"
FT DISULFID 85..103
FT /evidence="ECO:0000269|PubMed:21536670"
FT CONFLICT 15
FT /note="M -> I (in Ref. 2; RMX47400)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 107 AA; 11775 MW; 3C9DF23E68A5B46E CRC64;
MKVLVILFGA MLVLMEFQKA SAATLLEDFD DDDDLLDDGG DFDLEANSDA SSGNGNDSND
AVPEKRRACA DLRGKTFCRL FKSYCDKKGI RGRLMRDKCS YSCGCRG