AMT21_ORYSJ
ID AMT21_ORYSJ Reviewed; 486 AA.
AC Q84KJ7; A0A0P0WNK2; Q84K95;
DT 13-OCT-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Ammonium transporter 2 member 1;
DE Short=OsAMT2;1;
GN Name=AMT2-1; OrderedLocusNames=Os05g0468700, LOC_Os05g39240;
GN ORFNames=OJ1058_C01.9;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, SUBCELLULAR LOCATION,
RP TISSUE SPECIFICITY, AND INDUCTION.
RC STRAIN=cv. Sasanishiki; TISSUE=Root;
RX PubMed=12610225; DOI=10.1093/pcp/pcg017;
RA Suenaga A., Moriya K., Sonoda Y., Ikeda A., von Wiren N., Hayakawa T.,
RA Yamaguchi J., Yamaya T.;
RT "Constitutive expression of a novel-type ammonium transporter OsAMT2 in
RT rice plants.";
RL Plant Cell Physiol. 44:206-211(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Involved in ammonium transport.
CC {ECO:0000269|PubMed:12610225}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305|PubMed:12610225};
CC Multi-pass membrane protein {ECO:0000305|PubMed:12610225}.
CC -!- TISSUE SPECIFICITY: Expressed in roots and leaf blades and sheaths.
CC {ECO:0000269|PubMed:12610225}.
CC -!- INDUCTION: Not induced by ammonium supply in roots.
CC {ECO:0000269|PubMed:12610225}.
CC -!- SIMILARITY: Belongs to the ammonia transporter channel (TC 1.A.11.2)
CC family. {ECO:0000305}.
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DR EMBL; AB051864; BAB87832.1; -; mRNA.
DR EMBL; AB083581; BAC65231.1; -; Genomic_DNA.
DR EMBL; AC112159; AAT47008.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17715.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS94471.1; -; Genomic_DNA.
DR EMBL; AK065288; BAG89450.1; -; mRNA.
DR RefSeq; XP_015639562.1; XM_015784076.1.
DR AlphaFoldDB; Q84KJ7; -.
DR SMR; Q84KJ7; -.
DR STRING; 4530.OS05T0468700-01; -.
DR PaxDb; Q84KJ7; -.
DR PRIDE; Q84KJ7; -.
DR EnsemblPlants; Os05t0468700-01; Os05t0468700-01; Os05g0468700.
DR GeneID; 4339064; -.
DR Gramene; Os05t0468700-01; Os05t0468700-01; Os05g0468700.
DR KEGG; osa:4339064; -.
DR eggNOG; KOG0682; Eukaryota.
DR HOGENOM; CLU_000445_33_4_1; -.
DR InParanoid; Q84KJ7; -.
DR OMA; SAFMIFQ; -.
DR OrthoDB; 910733at2759; -.
DR BioCyc; MetaCyc:MON-14094; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q84KJ7; OS.
DR GO; GO:0005887; C:integral component of plasma membrane; IEA:InterPro.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0008519; F:ammonium transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0072488; P:ammonium transmembrane transport; IGI:UniProtKB.
DR Gene3D; 1.10.3430.10; -; 1.
DR InterPro; IPR029020; Ammonium/urea_transptr.
DR InterPro; IPR001905; Ammonium_transpt.
DR InterPro; IPR018047; Ammonium_transpt_CS.
DR InterPro; IPR024041; NH4_transpt_AmtB-like_dom.
DR InterPro; IPR002229; RhesusRHD.
DR PANTHER; PTHR43029; PTHR43029; 1.
DR Pfam; PF00909; Ammonium_transp; 1.
DR PRINTS; PR00342; RHESUSRHD.
DR TIGRFAMs; TIGR00836; amt; 1.
DR PROSITE; PS01219; AMMONIUM_TRANSP; 1.
PE 2: Evidence at transcript level;
KW Ammonia transport; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..486
FT /note="Ammonium transporter 2 member 1"
FT /id="PRO_0000385647"
FT TRANSMEM 29..49
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 57..77
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 127..147
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 161..181
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 225..245
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 252..272
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 285..305
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 309..329
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 343..363
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 399..419
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 454..473
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 486 AA; 51411 MW; D70842F92E8CB7E7 CRC64;
MAAAGAYSAS LPAVPDWLNK GDNAWQLTAS TLVGIQSMPG LVVLYGSIVK KKWAVNSAFM
ALYAYASSLL VWVLVGFRMA FGDQLLPFWG KAGVALTQSY LVGRATLPAT AHGAIPRTEP
FYPEATLVLF QFEFAAITLV LLAGSVLGRM NIKAWMAFTP LWLLLSYTVG AFSLWGGGFL
YRWGVIDYSG GYVIHLSSGI AGFTAAYWVG PRLKSDRERF SPNNILLMIA GGGLLWMGWA
GFNGGAPYAA NIAASVAVLN TNVCAATSLL MWTCLDVIFF RKPSVIGAVQ GMMTGLVCIT
PGAGLVQTWA AVVMGIFAGS VPWFTMMILH KKSALLMKVD DTLAVFHTHA VAGLLGGILT
GLLATPELFS LESTVPGLRG AFYGGGIKQI GKQLGGAAFV IAWNLVVTTA ILLGIGLFIP
LRMPDEQLMI GDDAAHGEEA YALWGDGEKF DATRHDLSRG GGGGDRDGPA GERLSALGAR
GVTIQL
