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GYS1_MOUSE
ID   GYS1_MOUSE              Reviewed;         738 AA.
AC   Q9Z1E4; P54859; Q3TBN4; Q8BQG4; Q8VEB0;
DT   11-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 2.
DT   03-AUG-2022, entry version 162.
DE   RecName: Full=Glycogen [starch] synthase, muscle;
DE            EC=2.4.1.11;
GN   Name=Gys1; Synonyms=Gys, Gys3;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=Swiss albino; TISSUE=Astrocyte;
RX   PubMed=8793107; DOI=10.1016/0169-328x(95)00305-c;
RA   Pellegri G., Rossier C., Magistretti P.J., Martin J.-L.;
RT   "Cloning, localization and induction of mouse brain glycogen synthase.";
RL   Brain Res. Mol. Brain Res. 38:191-199(1996).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Seldin M.F., Xue Z., Rochelle J.M., DeBry R., Surwit R.;
RT   "Mouse glycogen synthase gene.";
RL   Submitted (APR-1996) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J, and NOD; TISSUE=Dendritic cell, and Embryo;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=Czech II; TISSUE=Mammary tumor;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [6]
RP   PHOSPHORYLATION AT SER-8.
RX   PubMed=15561936; DOI=10.2337/diabetes.53.12.3074;
RA   Jorgensen S.B., Nielsen J.N., Birk J.B., Olsen G.S., Viollet B.,
RA   Andreelli F., Schjerling P., Vaulont S., Hardie D.G., Hansen B.F.,
RA   Richter E.A., Wojtaszewski J.F.;
RT   "The alpha2-5'AMP-activated protein kinase is a site 2 glycogen synthase
RT   kinase in skeletal muscle and is responsive to glucose loading.";
RL   Diabetes 53:3074-3081(2004).
RN   [7]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-412; SER-645; SER-649;
RP   SER-653; SER-657; SER-672; SER-709; THR-722; THR-724 AND SER-728, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain, Brown adipose tissue, Heart, Kidney, Lung, and Pancreas;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
CC   -!- FUNCTION: Transfers the glycosyl residue from UDP-Glc to the non-
CC       reducing end of alpha-1,4-glucan. {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[(1->4)-alpha-D-glucosyl](n) + UDP-alpha-D-glucose = [(1->4)-
CC         alpha-D-glucosyl](n+1) + H(+) + UDP; Xref=Rhea:RHEA:18549, Rhea:RHEA-
CC         COMP:9584, Rhea:RHEA-COMP:9587, ChEBI:CHEBI:15378, ChEBI:CHEBI:15444,
CC         ChEBI:CHEBI:58223, ChEBI:CHEBI:58885; EC=2.4.1.11;
CC   -!- ACTIVITY REGULATION: Allosteric activation by glucose-6-phosphate.
CC       Phosphorylation reduces the activity towards UDP-glucose. When in the
CC       non-phosphorylated state, glycogen synthase does not require glucose-6-
CC       phosphate as an allosteric activator; when phosphorylated it does (By
CC       similarity). {ECO:0000250}.
CC   -!- PATHWAY: Glycan biosynthesis; glycogen biosynthesis.
CC   -!- SUBUNIT: Interacts with GYG1. {ECO:0000250}.
CC   -!- PTM: Primed phosphorylation at Ser-657 (site 5) by CSNK2A1 and CSNK2A2
CC       is required for inhibitory phosphorylation at Ser-641 (site 3a), Ser-
CC       645 (site 3b), Ser-649 (site 3c) and Ser-653 (site 4) by GSK3A an
CC       GSK3B. Phosphorylated at Ser-641 by PASK, leading to inactivation;
CC       phosphorylation by PASK is inhibited by glycogen. Phosphorylated at
CC       Ser-641 by DYRK2, leading to inactivation. Dephosphorylation at Ser-641
CC       and Ser-645 by PP1 activates the enzyme (By similarity).
CC       Phosphorylation at Ser-8 by AMPK inactivates the enzyme activity.
CC       {ECO:0000250, ECO:0000269|PubMed:15561936}.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase 3 family. {ECO:0000305}.
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DR   EMBL; X94616; CAA64322.1; -; mRNA.
DR   EMBL; U53218; AAD09457.1; -; mRNA.
DR   EMBL; AK050813; BAC34420.1; -; mRNA.
DR   EMBL; AK171148; BAE42275.1; -; mRNA.
DR   EMBL; CH466603; EDL22855.1; -; Genomic_DNA.
DR   EMBL; BC019389; AAH19389.1; -; mRNA.
DR   EMBL; BC131687; AAI31688.1; -; mRNA.
DR   EMBL; BC131688; AAI31689.1; -; mRNA.
DR   EMBL; BC152550; AAI52551.1; -; mRNA.
DR   CCDS; CCDS21244.1; -.
DR   RefSeq; NP_109603.2; NM_030678.3.
DR   AlphaFoldDB; Q9Z1E4; -.
DR   SMR; Q9Z1E4; -.
DR   BioGRID; 200132; 18.
DR   IntAct; Q9Z1E4; 4.
DR   MINT; Q9Z1E4; -.
DR   STRING; 10090.ENSMUSP00000003964; -.
DR   CAZy; GT3; Glycosyltransferase Family 3.
DR   iPTMnet; Q9Z1E4; -.
DR   PhosphoSitePlus; Q9Z1E4; -.
DR   SwissPalm; Q9Z1E4; -.
DR   EPD; Q9Z1E4; -.
DR   jPOST; Q9Z1E4; -.
DR   MaxQB; Q9Z1E4; -.
DR   PaxDb; Q9Z1E4; -.
DR   PeptideAtlas; Q9Z1E4; -.
DR   PRIDE; Q9Z1E4; -.
DR   ProteomicsDB; 271352; -.
DR   Antibodypedia; 3582; 416 antibodies from 39 providers.
DR   DNASU; 14936; -.
DR   Ensembl; ENSMUST00000003964; ENSMUSP00000003964; ENSMUSG00000003865.
DR   GeneID; 14936; -.
DR   KEGG; mmu:14936; -.
DR   UCSC; uc009gve.1; mouse.
DR   CTD; 2997; -.
DR   MGI; MGI:101805; Gys1.
DR   VEuPathDB; HostDB:ENSMUSG00000003865; -.
DR   eggNOG; KOG3742; Eukaryota.
DR   GeneTree; ENSGT00390000018612; -.
DR   InParanoid; Q9Z1E4; -.
DR   OMA; YFFTSGR; -.
DR   OrthoDB; 264593at2759; -.
DR   PhylomeDB; Q9Z1E4; -.
DR   TreeFam; TF300306; -.
DR   Reactome; R-MMU-3322077; Glycogen synthesis.
DR   UniPathway; UPA00164; -.
DR   BioGRID-ORCS; 14936; 5 hits in 72 CRISPR screens.
DR   ChiTaRS; Gys1; mouse.
DR   PRO; PR:Q9Z1E4; -.
DR   Proteomes; UP000000589; Chromosome 7.
DR   RNAct; Q9Z1E4; protein.
DR   Bgee; ENSMUSG00000003865; Expressed in plantaris and 259 other tissues.
DR   ExpressionAtlas; Q9Z1E4; baseline and differential.
DR   Genevisible; Q9Z1E4; MM.
DR   GO; GO:0005737; C:cytoplasm; IDA:MGI.
DR   GO; GO:0005829; C:cytosol; IDA:MGI.
DR   GO; GO:0016234; C:inclusion body; IDA:MGI.
DR   GO; GO:0005536; F:glucose binding; ISO:MGI.
DR   GO; GO:0004373; F:glycogen (starch) synthase activity; IDA:MGI.
DR   GO; GO:0061547; F:glycogen synthase activity, transferring glucose-1-phosphate; IDA:MGI.
DR   GO; GO:0019901; F:protein kinase binding; ISO:MGI.
DR   GO; GO:0005978; P:glycogen biosynthetic process; IDA:MGI.
DR   GO; GO:0005977; P:glycogen metabolic process; ISO:MGI.
DR   GO; GO:0007507; P:heart development; IMP:MGI.
DR   InterPro; IPR008631; Glycogen_synth.
DR   PANTHER; PTHR10176; PTHR10176; 1.
DR   Pfam; PF05693; Glycogen_syn; 1.
PE   1: Evidence at protein level;
KW   Allosteric enzyme; Glycogen biosynthesis; Glycosyltransferase;
KW   Phosphoprotein; Reference proteome; Transferase.
FT   CHAIN           1..738
FT                   /note="Glycogen [starch] synthase, muscle"
FT                   /id="PRO_0000194765"
FT   REGION          632..738
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        653..671
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        678..692
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        696..738
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         39
FT                   /ligand="UDP-alpha-D-glucose"
FT                   /ligand_id="ChEBI:CHEBI:58885"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         8
FT                   /note="Phosphoserine; by AMPK and PKA"
FT                   /evidence="ECO:0000269|PubMed:15561936"
FT   MOD_RES         11
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P13834"
FT   MOD_RES         412
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         641
FT                   /note="Phosphoserine; by DYRK2, GSK3-alpha, GSK3-beta and
FT                   PASK"
FT                   /evidence="ECO:0000250|UniProtKB:P13834"
FT   MOD_RES         645
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         649
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         652
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:A2RRU1"
FT   MOD_RES         653
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         657
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         672
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         698
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P13834"
FT   MOD_RES         709
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         711
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P13807"
FT   MOD_RES         722
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         724
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         728
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   CONFLICT        3
FT                   /note="L -> R (in Ref. 1; CAA64322)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        70
FT                   /note="E -> V (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        80
FT                   /note="L -> M (in Ref. 3; BAE42275)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        111..112
FT                   /note="GP -> D (in Ref. 1; CAA64322)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        120
FT                   /note="G -> A (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        148
FT                   /note="A -> G (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        154..155
FT                   /note="FG -> YS (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        191
FT                   /note="C -> S (in Ref. 1; CAA64322)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        208
FT                   /note="L -> V (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        228
FT                   /note="N -> I (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        581..582
FT                   /note="QR -> HG (in Ref. 1; CAA64322)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        640
FT                   /note="A -> V (in Ref. 2; AAD09457)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   738 AA;  83927 MW;  D1F9252CA908FF69 CRC64;
     MPLSRSLSVS SLPGLEDWED EFDPENAVLF EVAWEVANKV GGIYTVLQTK AKVTGDEWGD
     NYYLVGPYTE QGVRTQVELL EPPTPELKRT LDSMNSKGCK VYFGRWLIEG GPLVVLLDVG
     ASAWALERWK GELWDTCNIG VPWYDREAND AVLFGFLTTW FLGEFLAQNE EKPYVVAHFH
     EWLAGVGLCL CRARRLPVAT IFTTHATLLG RYLCAGAVDF YNNLENFNVD KEAGERQIYH
     RYCMERAAAH CAHVFTTVSQ ITAIEAQHLL KRKPDIVTPN GLNVKKFSAM HEFQNLHAQS
     KARIQEFVRG HFYGHLDFNL DKTLYFFIAG RYEFSNKGAD VFLEALARLN YLLRVNGSEQ
     TVVAFFIMPA RTNNFNVETL KGQAVRKQLW DTANTVKEKF GRKLYESLLV GSLPDMNKML
     DKEDFTMMKR AIFATQRQSF PPVCTHNMLD DSSDPILTTI RRIGLFNSSA DRVKVIFHPE
     FLSSTSPLLP VDYEEFVRGC HLGVFPSYYE PWGYTPAECT VMGIPSISTN LSGFGCFMEE
     HIADPSAYGI YILDRRFRSL DDSCSQLTSF LYSFCQQSRR QRIIQRNRTE RLSDLLDWKY
     LGRYYMSARH MALAKAFPDH FTYEPHEVDA TQGYRYPRPA SVPPSPSLSR HSSPHQSEDE
     EEPRDGPLGE DSERYDEEEE AAKDRRNIRA PEWPRRASCS SSTGGSKRSN SVDTGPSSSL
     STPTEPLSPT SSLGEERN
 
 
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