H2B_LILLO
ID H2B_LILLO Reviewed; 158 AA.
AC Q9MBF7;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=Histone H2B.1;
DE AltName: Full=GH2B;
OS Lilium longiflorum (Trumpet lily).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Liliales; Liliaceae; Lilium.
OX NCBI_TaxID=4690;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 69-77, TISSUE SPECIFICITY,
RP AND DEVELOPMENTAL STAGE.
RX PubMed=10794571; DOI=10.1007/s004120050401;
RA Ueda K., Kinoshita Y., Xu Z.-J., Ide N., Ono M., Akahori Y., Tanaka I.,
RA Inoue M.;
RT "Unusual core histones specifically expressed in male gametic cells of
RT Lilium longiflorum.";
RL Chromosoma 108:491-500(2000).
CC -!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and compact
CC DNA into chromatin, limiting DNA accessibility to the cellular
CC machineries which require DNA as a template. Histones thereby play a
CC central role in transcription regulation, DNA repair, DNA replication
CC and chromosomal stability. DNA accessibility is regulated via a complex
CC set of post-translational modifications of histones, also called
CC histone code, and nucleosome remodeling.
CC -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC DNA.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in the generative cell within the
CC bicellular pollen. Not detected in other reproductive or vegetative
CC tissues. {ECO:0000269|PubMed:10794571}.
CC -!- DEVELOPMENTAL STAGE: Associated with the differentiation of male
CC gametic cells during pollen maturation. {ECO:0000269|PubMed:10794571}.
CC -!- PTM: Can be acetylated to form H2BK6ac and H2BK33ac. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the histone H2B family. {ECO:0000305}.
CC -!- CAUTION: To ensure consistency between histone entries, we follow the
CC 'Brno' nomenclature for histone modifications, with positions referring
CC to those used in the literature for the 'closest' model organism. Due
CC to slight variations in histone sequences between organisms and to the
CC presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the
CC actual positions of modified amino acids in the sequence generally
CC differ. In this entry the following conventions are used: H2BK6ac =
CC acetylated Lys-7; H2BK33ac = acetylated Lys-25. {ECO:0000305}.
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DR EMBL; AB003780; BAA96095.1; -; mRNA.
DR AlphaFoldDB; Q9MBF7; -.
DR SMR; Q9MBF7; -.
DR GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR InterPro; IPR000558; Histone_H2B.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR23428; PTHR23428; 1.
DR Pfam; PF00125; Histone; 1.
DR PRINTS; PR00621; HISTONEH2B.
DR SMART; SM00427; H2B; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
PE 1: Evidence at protein level;
KW Acetylation; Chromosome; Direct protein sequencing; DNA-binding;
KW Nucleosome core; Nucleus.
FT CHAIN 1..158
FT /note="Histone H2B.1"
FT /id="PRO_0000240655"
FT REGION 26..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 135..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 7
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250"
FT MOD_RES 25
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 158 AA; 17249 MW; 37A96D6D9117A0BD CRC64;
MPPRRKKKAA AAAAAAAAAA AAAGKAAAGK DGKAGIMTPK KPKKGKKKIP LMKYRVYIRR
VLTQVRPELG ISSKSMLIMN NFVVHNFQNI AKEASILAQY SKKKTITVKE LKAAVKLVLP
HQLLEYADRD GDRAVHNFES ETSKKNSQGR KRGRGQQT