H2B_ONCMY
ID H2B_ONCMY Reviewed; 124 AA.
AC P69069; P02282;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 63.
DE RecName: Full=Histone H2B;
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2997457; DOI=10.1007/bf02105800;
RA Winkfein R.J., Connor W., Mezquita J., Dixon G.H.;
RT "Histone H4 and H2B genes in rainbow trout (Salmo gairdnerii).";
RL J. Mol. Evol. 22:1-19(1985).
RN [2]
RP PROTEIN SEQUENCE OF 2-23, AND ACETYLATION AT LYS-6; LYS-11; LYS-14 AND
RP LYS-19.
RX PubMed=4506069; DOI=10.1073/pnas.69.8.2015;
RA Candido E.P.M., Dixon G.H.;
RT "Amino-terminal sequences and sites of in vivo acetylation of trout-testis
RT histones 3 and IIb 2.";
RL Proc. Natl. Acad. Sci. U.S.A. 69:2015-2019(1972).
CC -!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and compact
CC DNA into chromatin, limiting DNA accessibility to the cellular
CC machineries which require DNA as a template. Histones thereby play a
CC central role in transcription regulation, DNA repair, DNA replication
CC and chromosomal stability. DNA accessibility is regulated via a complex
CC set of post-translational modifications of histones, also called
CC histone code, and nucleosome remodeling.
CC -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC DNA.
CC -!- SUBCELLULAR LOCATION: Nucleus. Chromosome.
CC -!- PTM: Monoubiquitination of Lys-119 by BRE1 gives a specific tag for
CC epigenetic transcriptional activation and is also prerequisite for
CC histone H3 'Lys-4' and 'Lys-79' methylation.
CC {ECO:0000250|UniProtKB:P33778}.
CC -!- PTM: Phosphorylated during apoptosis; which facilitates apoptotic
CC chromatin condensation. {ECO:0000250|UniProtKB:P06900}.
CC -!- PTM: GlcNAcylation at Ser-111 promotes monoubiquitination of Lys-119.
CC It fluctuates in response to extracellular glucose, and associates with
CC transcribed genes (By similarity). {ECO:0000250|UniProtKB:P62807}.
CC -!- SIMILARITY: Belongs to the histone H2B family. {ECO:0000305}.
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DR EMBL; X02916; CAA26673.1; -; Genomic_DNA.
DR PIR; A92961; HSTR2B.
DR AlphaFoldDB; P69069; -.
DR SMR; P69069; -.
DR iPTMnet; P69069; -.
DR GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR InterPro; IPR000558; Histone_H2B.
DR PANTHER; PTHR23428; PTHR23428; 1.
DR Pfam; PF00125; Histone; 1.
DR PRINTS; PR00621; HISTONEH2B.
DR SMART; SM00427; H2B; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
DR PROSITE; PS00357; HISTONE_H2B; 1.
PE 1: Evidence at protein level;
KW Acetylation; Chromosome; Direct protein sequencing; DNA-binding;
KW Glycoprotein; Isopeptide bond; Nucleosome core; Nucleus; Phosphoprotein;
KW Ubl conjugation.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:4506069"
FT CHAIN 2..124
FT /note="Histone H2B"
FT /id="PRO_0000071851"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..33
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 6
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000269|PubMed:4506069"
FT MOD_RES 11
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000269|PubMed:4506069"
FT MOD_RES 13
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P06900"
FT MOD_RES 14
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000269|PubMed:4506069"
FT MOD_RES 19
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000269|PubMed:4506069"
FT CARBOHYD 111
FT /note="O-linked (GlcNAc) serine"
FT /evidence="ECO:0000250|UniProtKB:P62807"
FT CROSSLNK 119
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in ubiquitin)"
FT /evidence="ECO:0000250|UniProtKB:P0C1H4"
FT CONFLICT 29..30
FT /note="KR -> RK (in Ref. 1; CAA26673)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 124 AA; 13596 MW; 30097D5582BE0B84 CRC64;
MPEPAKSAPK KGSKKAVTKT AGKGGKKRKR SRKESYAIYV YKVLKQVHPD TGISSKAMGI
MNSFVNDIFE RIAGESSRLA HYNKRSTITS REIQTAVRLL LPGELAKHAV SEGTKAVTKY
TSSK