H2B_PHANO
ID H2B_PHANO Reviewed; 140 AA.
AC Q0U1A0;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Histone H2B;
GN Name=HTB1; ORFNames=SNOG_14612;
OS Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume
OS blotch fungus) (Parastagonospora nodorum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae;
OC Parastagonospora.
OX NCBI_TaxID=321614;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SN15 / ATCC MYA-4574 / FGSC 10173;
RX PubMed=18024570; DOI=10.1105/tpc.107.052829;
RA Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L.,
RA Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E.,
RA Torriani S.F.F., McDonald B.A., Oliver R.P.;
RT "Dothideomycete-plant interactions illuminated by genome sequencing and EST
RT analysis of the wheat pathogen Stagonospora nodorum.";
RL Plant Cell 19:3347-3368(2007).
CC -!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and compact
CC DNA into chromatin, limiting DNA accessibility to the cellular
CC machineries which require DNA as a template. Histones thereby play a
CC central role in transcription regulation, DNA repair, DNA replication
CC and chromosomal stability. DNA accessibility is regulated via a complex
CC set of post-translational modifications of histones, also called
CC histone code, and nucleosome remodeling.
CC -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC DNA.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
CC -!- PTM: Monoubiquitinated by BRE1 to form H2BK123ub1. H2BK123ub1 gives a
CC specific tag for epigenetic transcriptional activation and is also
CC prerequisite for H3K4me and H3K79me formation. H2BK123ub1 also
CC modulates the formation of double-strand breaks during meiosis and is a
CC prerequisite for DNA-damage checkpoint activation (By similarity).
CC {ECO:0000250}.
CC -!- PTM: Acetylated by GCN5 to form H2BK11ac and H2BK16ac. H2BK16ac can
CC also be formed by ESA1. Acetylation of N-terminal lysines and
CC particularly formation of H2BK11acK16ac has a positive effect on
CC transcription (By similarity). {ECO:0000250}.
CC -!- PTM: Sumoylation to form H2BK6su and probably also H2BK16su or
CC H2BK17su, occurs preferentially near the telomeres and represses gene
CC transcription. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the histone H2B family. {ECO:0000305}.
CC -!- CAUTION: To ensure consistency between histone entries, we follow the
CC 'Brno' nomenclature for histone modifications, with positions referring
CC to those used in the literature for the 'closest' model organism. Due
CC to slight variations in histone sequences between organisms and to the
CC presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the
CC actual positions of modified amino acids in the sequence generally
CC differ. In this entry the following conventions are used: H2BK6ac =
CC acetylated Lys-7; H2BK6su = sumoylated Lys-7; H2BK11ac = acetylated
CC Lys-14; H2BK16ac = acetylated Lys-24; H2BK16su = sumoylated Lys-24;
CC H2BK17su = sumoylated Lys-25; H2BK123ub1 = monoubiquitinated Lys-134.
CC {ECO:0000305}.
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DR EMBL; CH445356; EAT78152.1; -; Genomic_DNA.
DR RefSeq; XP_001804794.1; XM_001804742.1.
DR AlphaFoldDB; Q0U1A0; -.
DR SMR; Q0U1A0; -.
DR STRING; 13684.SNOT_14612; -.
DR PRIDE; Q0U1A0; -.
DR EnsemblFungi; SNOT_14612; SNOT_14612; SNOG_14612.
DR GeneID; 5981719; -.
DR KEGG; pno:SNOG_14612; -.
DR eggNOG; KOG1744; Eukaryota.
DR HOGENOM; CLU_075666_1_3_1; -.
DR InParanoid; Q0U1A0; -.
DR OMA; DIFDRMA; -.
DR OrthoDB; 1536672at2759; -.
DR Proteomes; UP000001055; Unassembled WGS sequence.
DR GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0035861; C:site of double-strand break; IEA:EnsemblFungi.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR GO; GO:0006334; P:nucleosome assembly; IBA:GO_Central.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR InterPro; IPR000558; Histone_H2B.
DR PANTHER; PTHR23428; PTHR23428; 1.
DR Pfam; PF00125; Histone; 1.
DR PRINTS; PR00621; HISTONEH2B.
DR SMART; SM00427; H2B; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
DR PROSITE; PS00357; HISTONE_H2B; 1.
PE 3: Inferred from homology;
KW Acetylation; Chromosome; DNA-binding; Isopeptide bond; Nucleosome core;
KW Nucleus; Reference proteome; Ubl conjugation.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..140
FT /note="Histone H2B"
FT /id="PRO_0000297851"
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..47
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 7
FT /note="N6-acetyllysine; alternate"
FT /evidence="ECO:0000250"
FT MOD_RES 14
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250"
FT MOD_RES 24
FT /note="N6-acetyllysine; alternate"
FT /evidence="ECO:0000250"
FT CROSSLNK 7
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO); alternate"
FT /evidence="ECO:0000250"
FT CROSSLNK 24
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO); alternate"
FT /evidence="ECO:0000250"
FT CROSSLNK 25
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO)"
FT /evidence="ECO:0000250"
FT CROSSLNK 134
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in ubiquitin)"
FT /evidence="ECO:0000250"
SQ SEQUENCE 140 AA; 15151 MW; DA58C07328D133DF CRC64;
MPPKAQKTPT TGGKAPAGKA PVEKKEAGKK TAAPSGEKKK RTKTRKETYS SYIYKVLKQV
HPDTGISNRA MSILNSFVTT THIFERVATE ASKLAAYNKK STISSREIQT SVRLILPGEL
AKHAVSEGTK AVTKYSSSTK