H3L1_LILLO
ID H3L1_LILLO Reviewed; 149 AA.
AC Q9MBF6; Q2Z2F7;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Histone H3-like 1;
DE AltName: Full=Generative cell-specific histone H3;
DE AltName: Full=Histone gH3;
GN Name=gH3;
OS Lilium longiflorum (Trumpet lily).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Liliales; Liliaceae; Lilium.
OX NCBI_TaxID=4690;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, AND TISSUE SPECIFICITY.
RC STRAIN=cv. Georgia;
RX PubMed=10794571; DOI=10.1007/s004120050401;
RA Ueda K., Kinoshita Y., Xu Z.-J., Ide N., Ono M., Akahori Y., Tanaka I.,
RA Inoue M.;
RT "Unusual core histones specifically expressed in male gametic cells of
RT Lilium longiflorum.";
RL Chromosoma 108:491-500(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], DEVELOPMENTAL STAGE, AND TISSUE
RP SPECIFICITY.
RC STRAIN=cv. White Fox;
RX PubMed=16915513; DOI=10.1007/s11103-006-9036-8;
RA Okada T., Singh M.B., Bhalla P.L.;
RT "Histone H3 variants in male gametic cells of lily and H3 methylation in
RT mature pollen.";
RL Plant Mol. Biol. 62:503-512(2006).
RN [3]
RP TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX PubMed=15927943; DOI=10.1093/pcp/pci139;
RA Sano Y., Tanaka I.;
RT "A histone H3.3-like gene specifically expressed in the vegetative cell of
RT developing lily pollen.";
RL Plant Cell Physiol. 46:1299-1308(2005).
CC -!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and compact
CC DNA into chromatin, limiting DNA accessibility to the cellular
CC machineries which require DNA as a template. Histones thereby play a
CC central role in transcription regulation, DNA repair, DNA replication
CC and chromosomal stability. DNA accessibility is regulated via a complex
CC set of post-translational modifications of histones, also called
CC histone code, and nucleosome remodeling (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC DNA.
CC -!- SUBCELLULAR LOCATION: Nucleus. Chromosome. Note=Distributed throughout
CC the chromatin.
CC -!- TISSUE SPECIFICITY: Pollen specific. {ECO:0000269|PubMed:10794571,
CC ECO:0000269|PubMed:15927943, ECO:0000269|PubMed:16915513}.
CC -!- DEVELOPMENTAL STAGE: Detected only in the generative cell of late
CC bicellular pollen and not in early bicellular pollen.
CC {ECO:0000269|PubMed:10794571, ECO:0000269|PubMed:15927943,
CC ECO:0000269|PubMed:16915513}.
CC -!- SIMILARITY: Belongs to the histone H3 family. {ECO:0000305}.
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DR EMBL; AB003783; BAA96098.1; -; mRNA.
DR EMBL; AB195646; BAE48429.1; -; mRNA.
DR EMBL; AB195647; BAE48430.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9MBF6; -.
DR SMR; Q9MBF6; -.
DR GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR InterPro; IPR000164; Histone_H3/CENP-A.
DR PANTHER; PTHR11426; PTHR11426; 1.
DR Pfam; PF00125; Histone; 1.
DR SMART; SM00428; H3; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
PE 2: Evidence at transcript level;
KW Chromosome; DNA-binding; Nucleosome core; Nucleus.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..149
FT /note="Histone H3-like 1"
FT /id="PRO_0000263048"
FT REGION 1..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..32
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 149 AA; 17421 MW; CAAD4FE85399A066 CRC64;
MARPRKEAPQ RNLDRDENAR QQPTEEPQDE APRNQGRQQQ QQRPPAAPRR PRRFRPGTVA
LREIRRIQRS NVPLIPHSPF MRLVRELAAE FLDDCRFAAE TFIMLKEVVE DELVNHFGNV
QICSIHAKRI IITVKDFKLA KLLKGEPED