HA11_RAT
ID HA11_RAT Reviewed; 319 AA.
AC P15978;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 1.
DT 25-MAY-2022, entry version 132.
DE RecName: Full=Class I histocompatibility antigen, Non-RT1.A alpha-1 chain;
DE Flags: Precursor;
GN Name=RT1-Aw2;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=2315309; DOI=10.1073/pnas.87.6.2167;
RA Rada C., Lorenzi R., Powis S.J., van den Bogaerde J., Parham P.,
RA Howard J.C.;
RT "Concerted evolution of class I genes in the major histocompatibility
RT complex of murine rodents.";
RL Proc. Natl. Acad. Sci. U.S.A. 87:2167-2171(1990).
RN [2]
RP PROTEIN SEQUENCE OF 25-49.
RX PubMed=3585249; DOI=10.1084/jem.165.6.1595;
RA Spencer S.C., Fabre J.W.;
RT "Identification in rat liver and serum of water-soluble class I MHC
RT molecules possibly homologous to the murine Q10 gene product.";
RL J. Exp. Med. 165:1595-1608(1987).
CC -!- FUNCTION: Involved in the presentation of foreign antigens to the
CC immune system.
CC -!- SUBUNIT: Heterodimer of an alpha chain and a beta chain (beta-2-
CC microglobulin).
CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein.
CC -!- SIMILARITY: Belongs to the MHC class I family. {ECO:0000305}.
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DR EMBL; M31038; AAA41608.1; -; mRNA.
DR PIR; B35090; B35090.
DR RefSeq; NP_036777.1; NM_012645.1.
DR AlphaFoldDB; P15978; -.
DR SMR; P15978; -.
DR GlyGen; P15978; 2 sites.
DR jPOST; P15978; -.
DR PRIDE; P15978; -.
DR GeneID; 24737; -.
DR CTD; 24737; -.
DR RGD; 3512; RT1-Aw2.
DR InParanoid; P15978; -.
DR PhylomeDB; P15978; -.
DR PRO; PR:P15978; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0009897; C:external side of plasma membrane; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0042612; C:MHC class I protein complex; IEA:UniProtKB-KW.
DR GO; GO:0002476; P:antigen processing and presentation of endogenous peptide antigen via MHC class Ib; IBA:GO_Central.
DR GO; GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.30.500.10; -; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003006; Ig/MHC_CS.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR011161; MHC_I-like_Ag-recog.
DR InterPro; IPR037055; MHC_I-like_Ag-recog_sf.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR InterPro; IPR001039; MHC_I_a_a1/a2.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF00129; MHC_I; 1.
DR PRINTS; PR01638; MHCCLASSI.
DR SMART; SM00407; IGc1; 1.
DR SUPFAM; SSF48726; SSF48726; 1.
DR SUPFAM; SSF54452; SSF54452; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS00290; IG_MHC; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Disulfide bond; Glycoprotein; Immunity;
KW Membrane; MHC I; Reference proteome; Signal; Transmembrane;
KW Transmembrane helix.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..319
FT /note="Class I histocompatibility antigen, Non-RT1.A alpha-
FT 1 chain"
FT /id="PRO_0000018943"
FT TOPO_DOM 25..307
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 308..319
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 209..295
FT /note="Ig-like C1-type"
FT REGION 25..114
FT /note="Alpha-1"
FT REGION 115..206
FT /note="Alpha-2"
FT REGION 207..298
FT /note="Alpha-3"
FT REGION 299..307
FT /note="Connecting peptide"
FT CARBOHYD 110
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000250"
FT CARBOHYD 280
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 125..188
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 227..283
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 319 AA; 36570 MW; E87C15B2409E1FC0 CRC64;
MGAMAPRTLL LLLAAVLAPT QTWAGSHSLR YFHTAVSRPG LGEPRFISVG YVDDTQFVRY
DSDAENPRYE PRARWMEREG PEYWEEQTLV AKGQELDYRV SLRNLLSYYN QSEGGSHTIQ
RMYGCDVGSD GSLLRGYEQH AYDGRDYIAL NEDLKTWAVA DFAAWITRSK WQRNGAAERS
RAYLEGTCVE WLLRYLERGK ETLLRSDPPE AHVTLHPRPE GDVTLRCWAL GFYPADITLT
WQLNGEDLTQ DMELVETRPA GDGTFQKWAS VVVPLGKEQN YTCRVEHEGL PEPLSQRWEP
SPSTDSNLLL LFLELWQFL