HA22B_ARATH
ID HA22B_ARATH Reviewed; 167 AA.
AC Q9SYX7; Q9XFG2;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 2.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=HVA22-like protein b;
DE Short=AtHVA22b;
GN Name=HVA22B; OrderedLocusNames=At5g62490; ORFNames=K19B1.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], TISSUE SPECIFICITY, AND
RP INDUCTION.
RC STRAIN=cv. Columbia;
RX PubMed=12081371; DOI=10.1023/a:1015593715144;
RA Chen C.-N., Chu C.-C., Zentella R., Pan S.-M., Ho T.-H.D.;
RT "AtHVA22 gene family in Arabidopsis: phylogenetic relationship, ABA and
RT stress regulation, and tissue-specific expression.";
RL Plant Mol. Biol. 49:633-644(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Predominantly expressed in flower buds.
CC {ECO:0000269|PubMed:12081371}.
CC -!- INDUCTION: By abscisic acid (ABA) and salt stresses.
CC {ECO:0000269|PubMed:12081371}.
CC -!- SIMILARITY: Belongs to the DP1 family. {ECO:0000305}.
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DR EMBL; AF141660; AAD31880.1; -; mRNA.
DR EMBL; AF141980; AAD31884.1; -; Genomic_DNA.
DR EMBL; AB015469; BAB11499.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97614.1; -; Genomic_DNA.
DR EMBL; AK118234; BAC42853.1; -; mRNA.
DR EMBL; BT005579; AAO63999.1; -; mRNA.
DR RefSeq; NP_201055.1; NM_125643.5.
DR AlphaFoldDB; Q9SYX7; -.
DR STRING; 3702.AT5G62490.1; -.
DR PaxDb; Q9SYX7; -.
DR ProteomicsDB; 247351; -.
DR EnsemblPlants; AT5G62490.1; AT5G62490.1; AT5G62490.
DR GeneID; 836369; -.
DR Gramene; AT5G62490.1; AT5G62490.1; AT5G62490.
DR KEGG; ath:AT5G62490; -.
DR Araport; AT5G62490; -.
DR TAIR; locus:2154139; AT5G62490.
DR eggNOG; KOG1725; Eukaryota.
DR HOGENOM; CLU_098452_0_0_1; -.
DR InParanoid; Q9SYX7; -.
DR OMA; PHSVNIW; -.
DR OrthoDB; 1473891at2759; -.
DR PhylomeDB; Q9SYX7; -.
DR PRO; PR:Q9SYX7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9SYX7; baseline and differential.
DR Genevisible; Q9SYX7; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0042538; P:hyperosmotic salinity response; IEP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR InterPro; IPR004345; TB2_DP1_HVA22.
DR PANTHER; PTHR12300; PTHR12300; 1.
DR Pfam; PF03134; TB2_DP1_HVA22; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Stress response; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..167
FT /note="HVA22-like protein b"
FT /id="PRO_0000101836"
FT TRANSMEM 18..38
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 47..67
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 68..88
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CONFLICT 23
FT /note="V -> M (in Ref. 1; AAD31880)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 167 AA; 18742 MW; BAA20618D5B15651 CRC64;
MSSGIGSLVK VIFKNFDVIA GPVISLVYPL YASVRAIESR SHGDDKQWLT YWALYSLIKL
FELTFFRLLE WIPLYPYAKL ALTSWLVLPG MNGAAYLYEH YVRSFLLSPH TVNVWYVPAK
KDDDLGATAG KFTPVNDSGA PQEKIVSSVD TSAKYVGHSA FDDAYIY
