HA22C_ARATH
ID HA22C_ARATH Reviewed; 184 AA.
AC Q9S784;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=HVA22-like protein c;
DE Short=AtHVA22c;
GN Name=HVA22C; OrderedLocusNames=At1g69700; ORFNames=T6C23.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=12081371; DOI=10.1023/a:1015593715144;
RA Chen C.-N., Chu C.-C., Zentella R., Pan S.-M., Ho T.-H.D.;
RT "AtHVA22 gene family in Arabidopsis: phylogenetic relationship, ABA and
RT stress regulation, and tissue-specific expression.";
RL Plant Mol. Biol. 49:633-644(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Predominantly expressed in flower buds and stem.
CC {ECO:0000269|PubMed:12081371}.
CC -!- SIMILARITY: Belongs to the DP1 family. {ECO:0000305}.
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DR EMBL; AF141661; AAD31881.1; -; mRNA.
DR EMBL; AF141978; AAD31886.1; -; Genomic_DNA.
DR EMBL; AC013289; AAG52538.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE34964.1; -; Genomic_DNA.
DR EMBL; AY065456; AAL38897.1; -; mRNA.
DR EMBL; AY142652; AAN13190.1; -; mRNA.
DR EMBL; AY084473; AAM61044.1; -; mRNA.
DR PIR; H96718; H96718.
DR RefSeq; NP_177128.1; NM_105638.4.
DR AlphaFoldDB; Q9S784; -.
DR STRING; 3702.AT1G69700.1; -.
DR PaxDb; Q9S784; -.
DR PRIDE; Q9S784; -.
DR ProteomicsDB; 230284; -.
DR EnsemblPlants; AT1G69700.1; AT1G69700.1; AT1G69700.
DR GeneID; 843306; -.
DR Gramene; AT1G69700.1; AT1G69700.1; AT1G69700.
DR KEGG; ath:AT1G69700; -.
DR Araport; AT1G69700; -.
DR TAIR; locus:2205055; AT1G69700.
DR eggNOG; KOG1725; Eukaryota.
DR HOGENOM; CLU_098452_0_0_1; -.
DR InParanoid; Q9S784; -.
DR OMA; EEHGTHE; -.
DR OrthoDB; 1473891at2759; -.
DR PhylomeDB; Q9S784; -.
DR PRO; PR:Q9S784; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9S784; baseline and differential.
DR Genevisible; Q9S784; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0042538; P:hyperosmotic salinity response; IEP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IEP:TAIR.
DR InterPro; IPR004345; TB2_DP1_HVA22.
DR PANTHER; PTHR12300; PTHR12300; 1.
DR Pfam; PF03134; TB2_DP1_HVA22; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..184
FT /note="HVA22-like protein c"
FT /id="PRO_0000101837"
FT TRANSMEM 13..33
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 51..71
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 73..93
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 184 AA; 22033 MW; BECD597224876A0C CRC64;
MPSNSGDDNV LQVLIKNFDV LALPLVTLVY PLYASVKAIE TRSLPEDEQW LTYWVLYALI
SLFELTFSKP LEWFPIWPYM KLFGICWLVL PQFNGAEHIY KHFIRPFYRD PQRATTKIWY
VPHKKFNFFP KRDDDDILTA AEKYMEQHGT EAFERMIVKK DSYERGRSSR GINNHMIFDD
DYRY
